📚 Parameterize, execute, and analyze notebooks

An open RNA-Seq data analysis pipeline tutorial with an example of reprocessing data from a recent Zika virus study

Automated generation of tailored bioinformatics Jupyter Notebooks via a user interface.

A reactive notebook for Python — run reproducible experiments, query with SQL, execute as a script, deploy as an app, and version with git. Stored as pure Python. All in a modern, AI-native editor.

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Notebooks, code samples, sample apps, and other resources that demonstrate how to use, develop and manage machine learning and generative AI workflows using Google Cloud Vertex AI.

A framework (comand line tool + libraries) for creating flexible compute pipelines

A toolbox 🧰 for Jupyter notebooks 📙: testing, experiment tracking, debugging, profiling, and more!

Detects the pipeline steps for any notebook files based on keywords.

DSPy program/pipeline inspector widget for Jupyter/VSCode Notebooks.

Pipeline analysis for whole exome sequencing of pancreatic cancer PDX models

Python notebook tutorials for astronomical FITS analysis

Useful scripts and notebooks for Data Science. The project was made by Miquido. https://www.miquido.com/

Pipelines for data analysis and visualization of the Ralstonia energy metabolism

Real time estimation of epidemic Effective Reproduction Number for Luxembourg

R markdown notebooks for analysis of CRISPR inhibition library data

Pipelines for data analysis and visualization of the Ralstonia proteome

Bodywork deployment template demonstrating how to build ML pipelines with Jupyter notebooks and Bodywork.

In this notebook, I have created a SPAM and HAM filter predictions on the dataset Spam ham collection from UCI repository

Interactive ML Toolset