The pdbx-validation is a generation tool of alternative wwPDB validation reports

A PDBx/mmCIF-format parser and extractor.

Convert in batch CIF files to PDB

Extract chains' and polypeptides' sequences from PDB or mmCIF files.

Program to add sequences and data collection statistics to mmCIF files for PDB deposition

Fixes mmCIF protein structure files

Parts of Gemmi in WebAssembly.

Open-source framework for simple and fast integration of protein structure data with sequence annotations and genetic variation

Encode information from a HADDOCK run to a cif file to be deposited in PDB-Dev.

A small, developer-friendly 3D molecule viewer for the modern web

Benchmarks for reading and interpreting mmCIF files

Program to plot a Ramachandran plot of all dihedral angles from a given PDB file. Background is empirically generated from the peptides in the Top8000 PDB data set.

Supports the use of PyMOL in literate programming in org-mode, which is best run in Emacs.

👋 Webserver & command-line tool for search of APO (unbound) protein structures from HOLO (bound) forms and vice versa. http://apoholo.cz

Super lightweight and fast mmCIF/PDB/MOL2 file parser into Pandas DataFrames and backwards writer.

Search PDB by elements.

📦 A Command Line Tool for downloading protein structures, sequences and MSAs

Protein Structure Archiver

📖 mmCIF support for hybrid/integrative models