An analysis toolkit for particle tracking microrheology (moved from Launchpad).
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Apr 14, 2024 - Python
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microrheology
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This code performs generalized Brownian dynamics (GBD) simulations of a microparticle embedded in a viscoelastic fluid and calculates and propagates statistical and other sources of error in passive microrheology
viscoelastic uncertainty-estimation uncertainty-propagation brownian-motion brownian-dynamics microrheology
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Mar 9, 2024 - Python
A provenance-checked protocol for handing a question between an experiment agent and a simulation agent, so each re-derives its own plan through its own gates instead of importing the other's numbers.
json-schema provenance reproducibility agents soft-matter brownian-dynamics optical-tweezers microrheology research-automation llm-agents
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Sep 17, 2026 - Python
An app to extract complex viscoelasticity from optical tweezer stretch-strain rheology measurements of chromosomes and other single molecules
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Jul 15, 2025 - MATLAB
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