Python package to study microbial communities using metabolic modeling.
Les études de métagénomiques mettent en évidence la présence et l'absence de différentes souches dans un microbiome. Pour résumer les abondances, on peut établir des graphes de co-occurence via : Rapid inference of direct interactions in large-scale ecological networks from heterogeneous microbial sequencing data, Janko Tackmann, Joao Frederico …
The Celiac Microbiome Repository is a comprehensive collection of all available gut microbiome sequencing datasets that include individuals with celiac disease.
Constellab brick for microbiome data analysic
Repository with scripts and data generated during my internship at Institut Pasteur of Paris
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