Some notes on microbiome analysis

Data set for analyzing how a gut microbiome is affected by drinking kombucha

MetaMed

Tutorials on microbiome analysis using the Quantitative Insights Into Microbial Ecology (QIIME) platform

Examination of microbial diversity patterns

Analyses for Guiding longitudinal sampling in IBD cohorts

scripts for microbiome analysis

Microbiome Amplicon Analysis and Visualization

R scripts used for analysis of data reported in Comparison of Small Gut and Whole Gut Microbiota of First-Degree Relatives with Adult Patients with Celiac Disease and Controls

Doctoral dissertation

Chef Cookbook for configuring Microbiome Data Sharing Portal

Uncovering the microbes of fraternity basements

Flask RESTFUL back-end for the BU microbiome-initiative web application

Front-end for the BU Microbiome Initiative webapp

Using graph database techniques to understand the infectious relationships between bacteria and phages.

Metagenomics pipeline for human diet analysis using organelles genomes

A repository containing a demo microbiome workflow for R and Python