This is an automated workflow pipeline for analyzing and processing Bulk-RNA seq data, implemented primarily in bash, python and R, and wrapped in a NextFlow workflow to characterize the gene landscape in the samples.
rna-seq multiqc star bedtools rna-seq-analysis samtools featurecounts bamtools htseq-count stringtie bulk-rna-seq nextflow-pipelines bulk-sequencing
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Updated
Nov 22, 2024 - Nextflow