Interactive network visualization in Python and Dash, powered by Cytoscape.js

A Cytoscape Jupyter widget

Python library for calling Cytoscape Automation via CyREST

Python script that visualizes international commodity trade networks quickly and beautifully

Table-based network visualizer

We want to convert some cystoscape node-edge graph file (under pkl format) to JSON format file which can be used by other program.

Protein Cluster Quant is a Java software for the analysis of complex proteomics samples (quantitative or not). It helps to reduce the redundancy of the peptide-to-protein relationship and to visualize the results in a bipartite network (Cytoscape).

Export GO-CAMs to SIF (Python)

A computable distributed debate graph tool

A command line and GUI tool for visualizing protein-protein interaction networks.

Python object for dash-cytoscape elements

Published in GigaScience. Web app for post-GWAS/QTL analysis that performs a slew of novel bioinformatics analyses to cross-reference GWAS/QTL mapping results with a host of publicly available rice databases

哈工大（HIT） 软件工程（Software Engineering）课程实验1 词图可视化

Dash-Bipartite contains tools to create two columns graphs/bipartite graphs dash components.

Dash Cytoscape to Visualize Relationship between Twitter Accounts

Convert RDF Turtle ontology files to CSV format for network visualization. Supports DBpedia, SKOS, multi-graph analysis with Gephi/Cytoscape integration.

Interactive Database Schema Visualizer - Explore database relationships through dynamic, interactive graphs. Built with Python, Streamlit & Cytoscape.js. Supports MSSQL & MySQL with BFS filtering and real-time schema analysis.

Wikipedia crawler with live graphing of article relationships.