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18 public repositories
matching this topic...
Explore the cancer relevance of your gene list
Comprehensive design of CRISPR gRNAs for nucleases and base editors
On-Target and Off-Target Scoring Algorithms for CRISPR gRNAs
Updated
Oct 4, 2024
Python
Fork of Azimuth (Machine Learning-Based Predictive Modelling of CRISPR/Cas9 guide efficiency), updated to work with Python 3.10+
Updated
Nov 25, 2023
Python
CRISPR/Cas-directed HDR genome editing suite: finds+scores gRNA targets, generates donor DNAs, & produces optimal cPCR primer designs.
Updated
Oct 18, 2021
Python
Search guide-RNA sequences given a genome or gene sequence
BWA-based alignment of CRISPR gRNA spacer sequences
Pre-trained models for the crisprScore package
Research associated to CRISPR-Cas. Completed under Dr. Manuel Lladser at CU boulder
Updated
Dec 2, 2018
MATLAB
Base functions and classes for CRISPR gRNA design
CRISPR-Cas9 Excision Therapy Suitability
Updated
Jun 29, 2018
Python
Useful human and mouse data for the crisprVerse ecosystem
Collection of R packages that work in harmony for CRISPR gRNA design
CRISPR sgRNAs guide analysis software
Updated
May 6, 2021
Python
Bowtie-based alignment of CRISPR gRNA spacer sequences
🔬 Genotyping tool for genome-edited samples, utilizing nanopore sequencer target sequencing
Updated
Nov 1, 2024
Python
Tutorials for the crisprVerse
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