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18 public repositories
matching this topic...
Explore the cancer relevance of your gene list
Comprehensive design of CRISPR gRNAs for nucleases and base editors
On-Target and Off-Target Scoring Algorithms for CRISPR gRNAs
Updated
Oct 4, 2024
Python
Collection of R packages that work in harmony for CRISPR gRNA design
CRISPR/Cas-directed HDR genome editing suite: finds+scores gRNA targets, generates donor DNAs, & produces optimal cPCR primer designs.
Updated
Oct 18, 2021
Python
Tutorials for the crisprVerse
🔬 Genotyping tool for genome-edited samples, utilizing nanopore sequencer target sequencing
Updated
Nov 1, 2024
Python
Base functions and classes for CRISPR gRNA design
Useful human and mouse data for the crisprVerse ecosystem
Search guide-RNA sequences given a genome or gene sequence
CRISPR sgRNAs guide analysis software
Updated
May 6, 2021
Python
Bowtie-based alignment of CRISPR gRNA spacer sequences
Pre-trained models for the crisprScore package
BWA-based alignment of CRISPR gRNA spacer sequences
Fork of Azimuth (Machine Learning-Based Predictive Modelling of CRISPR/Cas9 guide efficiency), updated to work with Python 3.10+
Updated
Nov 25, 2023
Python
Research associated to CRISPR-Cas. Completed under Dr. Manuel Lladser at CU boulder
Updated
Dec 2, 2018
MATLAB
CRISPR-Cas9 Excision Therapy Suitability
Updated
Jun 29, 2018
Python
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