Differentiable molecular simulation of proteins with a coarse-grained potential
-
Updated
Apr 3, 2025 - Python
#
coarse-grained
Here are 8 public repositories matching this topic...
Swarm-CG: Automatic Parametrization of Bonded Terms in MARTINI-based Coarse-Grained Models of Simple to Complex Molecules via Fuzzy Self-Tuning Particle Swarm Optimization
optimization molecular-dynamics optimization-tools gromacs coarse-grained coarse-graining molecular-modeling bonded-terms bonded-parameters swarm-cg cg-model
-
Updated
Aug 19, 2024 - Python
COBY (Coarse Grained System Builder) can be used to create coarse-grained systems in Martini 3
-
Updated
Nov 25, 2025 - Python
Massively parallel hybrid particle-field molecular dynamics in Python.
-
Updated
Sep 6, 2024 - Python
A toolkit for working with coarse-grain systems
-
Updated
Mar 12, 2026 - Python
Force field parameters and supplementary scripts for the "A coarse-grained model for DNA origami" paper by R. Reshetnikov, A. Stolyarova, A. Zalevsky et. al.
-
Updated
May 4, 2021 - Python
Analyze two-component nanoparticle properties for classical molecular dynamics simulations
-
Updated
Oct 24, 2022 - Python
cgpm: Symbolic Regression for Coarse-Grained Potential Modeling
-
Updated
Oct 28, 2025 - Python
Improve this page
Add a description, image, and links to the coarse-grained topic page so that developers can more easily learn about it.
Add this topic to your repo
To associate your repository with the coarse-grained topic, visit your repo's landing page and select "manage topics."