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chemical-reaction-networks

Here are 4 public repositories matching this topic...

augustinas1 / MomentClosure.jl

Tools to generate and study moment equations for any chemical reaction network using various moment closure approximations

systems-biology moments chemical-reaction-networks stochastic-processes gene-network gillespie-algorithm moment-equations moment-closure

Updated Aug 12, 2024
Julia

SciML / SBMLToolkit.jl

SBML differential equation and chemical reaction model (Gillespie simulations) for Julia's SciML ModelingToolkit

julia systems-biology ode differential-equations chemical-reaction-networks sbml gillespie-algorithm quantitative-systems-pharmacology sciml

Updated Oct 16, 2024
Julia

SciML / FiniteStateProjection.jl

Finite State Projection algorithms for chemical reaction networks

systems-biology julia-package chemical-reaction-networks gene-network gillespie-algorithm stochastic-simulations biological-modeling finite-state-projection

Updated Oct 17, 2024
Julia

xiaomingfu2013 / DelaySSAToolkit.jl

DelaySSAToolkit.jl: a tool in Julia for stochastic simulation with delays

systems-biology stochastic-process chemical-reaction-networks stochastic-simulation-algorithm gene-network gillespie-algorithm delay-systems

Updated Apr 1, 2024
Julia

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