Python Package for the Analysis of Spheroid Microcopy Data
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May 13, 2026 - Jupyter Notebook
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cell-culture
Here are 16 public repositories matching this topic...
Designing and automated cell culture system with precise volume control for a streamlined workflow in the Biolabs
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Apr 10, 2025 - Python
Agentic AI harness for complex, autonomous, long-horizon biological tasks: pre-experiment DoE planning in fermentation, bioprocess, and biomanufacturing, designed with biosafety in mind. Readiness gating, scale-up and scale-down bridging.
linear fermentation design-of-experiments doe scale-up cell-culture bioreactor scale-down kla bioprocess perfusion biomanufacturing fed-batch agentic-ai claude-code openai-agents claude-skill long-running-agent biosafety-aware drylab
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May 7, 2026 - Python
Browser-based Neubauer count and inoculum calculator for CHO cell culture passaging.
pwa browser-based cell-culture cell-counting viability hemocytometer neubauer-chamber inoculum-calculation passaging cho-cells lab-calculations
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Apr 7, 2026 - JavaScript
This is MATLAB script created and used via the Trinkaus-Randall Lab at Boston University for the analysis of epithelial cellular calcium signaling during wound healing.
cell intensity calcium-imaging calcium intensity-analysis cell-culture calcium-imaging-analyzer wound-healing cornea calcium-imaging-analysis
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Jun 12, 2024 - MATLAB
Researchers use cell calculators in order to plan their experiments. Traditionally, they use excel spreadsheets, but the UI is not necessarily user friendly. It's also difficult to understand. The idea with this cell culture calculator is to give the researcher a 'single finger experience' (think Tinder, Reddit, etc.) to input the values and sel…
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Feb 22, 2022 - JavaScript
1st Price Hack'In Saclay 26 - Health Section
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Feb 2, 2026 - Jupyter Notebook
Browser-based kinetic analysis for CHO fed-batch sampling data with IVCD, q rates, yields, and plots.
plotly browser-based cell-culture ivcd fed-batch growth-kinetics cho-cells metabolite-analysis upstream-bioprocessing bioprocess-data specific-productivity
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Apr 11, 2026 - JavaScript
BioReact is a Python tool for simulating the dynamics of a Continuous Stirred Tank Bioreactor (CSTR). It uses the Monod model and Runge-Kutta method, with customizable parameters and automated visualizations, ideal for biotechnology research.
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Mar 13, 2026 - Jupyter Notebook
GitHub profile and project hub for browser-based scientific tools in cell culture and bioprocessing.
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Apr 9, 2026 - HTML
Web-based biosafety cabinet scheduler for shared cell culture labs with booking rules and live availability.
react pwa multi-user scientific-software cell-culture vite supabase resource-booking lab-scheduling biosafety-cabinet
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Mar 31, 2026 - JavaScript
A webapp to make visualizing and analyzing CellPathfinder data easier. CellPathfinder is a high content cell image analysis software from Yokogawa. https://terrianl.shinyapps.io/GraphMaster9000/
toxicology pharmacology data-visualization data-analysis image-analysis biomedical biomedical-engineering cell-culture yokogawa cellpathfinder
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Jul 18, 2022 - R
Browser-based replicate QC and control correction for YSI 2950 BioSample CSV exports.
quality-control outlier-detection csv-processing browser-based cell-culture biosample ysi-2950 metabolite-analysis lab-calculations replicate-analysis
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May 20, 2026 - JavaScript
Browser-based calculators, analyzers, and simulators for upstream cell culture and bioprocess workflows.
pwa vanilla-javascript scientific-computing hplc flow-cytometry browser-based cell-culture bioprocessing biomanufacturing cho-cells ysi-2950 upstream-bioprocessing lab-calculations bioprocess-data
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May 11, 2026 - HTML
Bioprocess-native time-series database — built on DuckDB, Apache Arrow, and Parquet
python bioinformatics time-series data-engineering parquet fermentation time-series-database audit-trail biotech apache-arrow cell-culture bioprocess duckdb fda-21-cfr-part-11 phase-detection
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May 11, 2026 - Python
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