Quick-Start for life scientists willing to use Matlab (for fluorescence microscopy, mass spectrometry, x-ray crystallography, single-particle electron microscopy, kinetics ...).. No background in programming is required.

Kaggle Human Protein Atlas Image Classification (Top 6% 122 place)

Python scripts to quantiatively describe Arp2/3 complex organization on travelling Actin Waves

Count-Ception: Counting by Fully Convolutional Redundant Counting

Analysis scripts for the manuscript "Spindle checkpoint silencing at kinetochores at submaximal microtubule occupancy" by Etemad et al. "

Tool for semi-automatic tracking of migrating Dictyostelium cells from phase-contrast time-lapse image series

Counting cells in a blood smear using convolution as the pattern matching strategy

Easy-to-use traction force microscopy (TFM) software

Normal mode analysis from meshes

Simulate a system of linear filaments

BioMight - Human Biological Animation Engine

Tutorial for single cell analysis of nuclear translocation measured by timelapse imaging

analyzing images of mechanical stimulation on low elastic modulus dishes (mSLED)

Detecting and Tracking cancer (HeLa) cells using Computer Vision techniques. The project also detects cell division and analyses cell motion such as speed, distance travelled etc. The project uses OpenCV3 for image processing.

Usiigaci: stain-free cell tracking in phase contrast microscopy enabled by supervised machine learning

This is a website for visualizing the processes in the field of cytology.

NLP on biology paper abstracts