Repositório para apresentação de código desenvolvido pelo grupo 3 para a UC Algoritmos para Análise Sequências Biológicas do Mestrado em Bioinformática, ano lectivo 23-24.

Guia de programas e ferramentas de bioinformática e química computacional

Repository for CT2 Alignment group

a block basis estimate of the whole genome alignment estimates

Algorithm to parse, assemble and align genomic sequences by use machine learning techniques. The resulting sequences are used to form NCBI-BLAST respects and return sequence homologs.

One-to-one string aligner that's kinda Monte Carlo

Toolbox for fast, variational 1D alignment

Simple php script implementing a naive global alignment for dna sequences.

Aligns 3D einscan meshes to those produced from MRI scans to enable the functional information from an OPM-MEG experiment to be overlaid onto structural brain imagery obtained via MRI

Computing IV coursework.

The global pairwise sequence alignment algorithm is a bioinformatics method that aligns two sequences from start to finish to identify the optimal sequence alignment based on predefined scoring parameters. Fun example of Parallelization with OpenMP.

Alignement structurale d'une séquence protéique sur une structure protéique 3D.

ImageJ and Fiji Plugin for fast, variational 1D alignment of multichannel linescan data

A Node.JS function to compare two arrays with the smith-waterman Algorithm

Restore safety in fine-tuned language models through task arithmetic

RUITE, a UI layout refiner that allows designers to automatically align and group the given UI layout.

2022 CCF大数据与计算智能大赛——带噪音的社交网络对齐 (the competition - Social Network Alignment under Noise Intervention at CCF BDCI 2022) [Baseline]

This highly responsive VB6 application is an implementation of the global sequence alignment algorithm. It allows the modification of the alignment parameters (match, mismatch, gap), and it shows the pairwise alignment as well as the score matrix in real time. The purpose of it is to seeks the optimal alignment between two text sequences.

Reproducible evaluation of short read mappers