Closed
Description
Reported by @samir-watson in #132
Hi @tleonardi,
I have had a good look at what was happening with and it seems to a problem with pipes in the fasta headers that are being carried over from the fasta I used during SampComp so when I compare the SampCompDB database to the bed file there is no longer a match.
I will try and redo the alignment with the pipes and extra IDs removed and see if that works.On another note I found a tiny issue in SampCompDB.py line 421, it says "red_if" and I think its meand to be ref_id.
Cheers,
Samir
Metadata
Assignees
Labels
No labels