Skip to content

tuning with outcome level "class" #487

Closed
@simonpcouch

Description

@simonpcouch

I came across this while writing tests for a fix to tidymodels/stacks#125. It seems like tuning fails when the level of an outcome is "class":

library(tidymodels)

# works okay with class_1 and class_2:
x <- tibble(
  class = sample(c("class_1", "class_2"), 100, replace = TRUE),
  a = rnorm(100),
  b = rnorm(100)
)

res <- tune_grid(
  logistic_reg(engine = 'glmnet', penalty = tune(), mixture = 1),
  preprocessor = recipe(class ~ ., x),
  resamples = vfold_cv(x, 2),
  grid = 2,
  control = control_grid()
)

# fails on outcome with level "class"
x_ <- tibble(
  class = sample(c("class_1", "class"), 100, replace = TRUE),
  a = rnorm(100),
  b = rnorm(100)
)

res_ <- tune_grid(
  logistic_reg(engine = 'glmnet', penalty = tune(), mixture = 1),
  preprocessor = recipe(class ~ ., x_),
  resamples = vfold_cv(x_, 2),
  grid = 2,
  control = control_grid()
)
#> x Fold1: internal: Error:
#> ! In metric: `accuracy`
#> Problem while computing `.estim...
#> x Fold2: internal: Error:
#> ! In metric: `accuracy`
#> Problem while computing `.estim...
#> Warning: All models failed. See the `.notes` column.

Created on 2022-05-03 by the reprex package (v2.0.1)

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Type

    No type

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions