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We at @fiftythree use a clustered Neo4j setup, and for scalability/performance, we see ourselves wanting to split our queries between the master and the slaves depending on whether they need to be immediately consistent or can be eventually consistent.
To do that, we'd currently need two different GraphDatabase instances (pointing to different URLs), but there isn't currently a way to share Node or Relationship instances between the separate db instances. E.g. make a read query against a slave db, get back nodes/rels, and perform a write query from them to the master db.
We'll probably need to rethink the API to support this scenario...