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ResistanceProfiler
ResistanceProfiler PublicAntiviral resistance analysis framework for any virus
Python 3
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respro-databases
respro-databases PublicThis is the official ResistanceProfiler companion repository containing database ports of publicly maintained antiviral resistance databases.
Python
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NoroTracer
NoroTracer PublicNextflow workflow for genomic surveillance and transmission-chain analysis of norovirus sequencing data.
Nextflow
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CVG_Amplicon_Flow
CVG_Amplicon_Flow PublicCVG Amplicon Flow is a Snakemake-based workflow for processing viral amplicon sequencing data. It performs quality control, read mapping, primer trimming, consensus genome generation, variant calli…
Python
Repositories
- NoroTracer Public
Nextflow workflow for genomic surveillance and transmission-chain analysis of norovirus sequencing data.
- respro-databases Public
This is the official ResistanceProfiler companion repository containing database ports of publicly maintained antiviral resistance databases.
- CVG_Amplicon_Flow Public
CVG Amplicon Flow is a Snakemake-based workflow for processing viral amplicon sequencing data. It performs quality control, read mapping, primer trimming, consensus genome generation, variant calling, and BAM visualization.
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