Merge branch 'master' of github.com:tf2/CNest

tf2 · Oct 26, 2023 · 07892f4 · 07892f4
2 parents eac747b + 8731545
commit 07892f4
Showing 1 changed file with 4 additions and 3 deletions.
diff --git a/Dockerfile b/Dockerfile
@@ -115,10 +115,11 @@ RUN rm -rf /$CNV_APP /Rbin_1.1.tar.gz /ViteRbi_1.0.tar.gz /samtools-$VERSION /ht
 RUN mkdir -p /resources/ /input/ /output/ /ref/
 ENV REF_PATH=/ref/%2s/%2s/%s
 
-COPY src/run src/run.R src/cnest.py /resources/
+COPY src/run src/run.R src/cnest.py src/cnest_dev.py /resources/
 RUN chmod +x /resources/cnest.py
+RUN chmod +x /resources/cnest_dev.py
 
-ENTRYPOINT ["python3.8", "/resources/cnest.py"]
+ENTRYPOINT ["python3.8", "/resources/cnest_dev.py"]
 
 ########################################################################
 # Run Notes:
@@ -144,4 +145,4 @@ ENTRYPOINT ["python3.8", "/resources/cnest.py"]
 # e.g. for step7:
 # docker run -v <YOUR INPUT DIR>:/input_location -v  <YOUR OUTPUT DIR>:/output_location  -it cnv:1.0 ./resources/run step7 cnv-project <SAMPLE_INDEX>
 #
-########################################################################
+########################################################################