ENH: Add parcellations (FS's annot files)#5
Merged
Conversation
…llations released with FreeSurfer 7
Member
Author
|
@yasseraleman this is how this looks now: As you can see, we have the Destrieux with the year in the atlas name: We also have the different lausanne scales: And finally, Schaefer demonstrating seg- and scale- together: WDYT? |
Member
Author
|
Okay, I have @yasseraleman's verbal thumbs up. I'll go ahead and complete this with the right hemisphere and metadata. |
Contributor
|
I'm overall okay with this. I'm not really sure how these new entities will interact with BIDS, but I'm okay with figuring that out as use cases come up. |
Member
Author
|
Added default tsv files. |
Closed
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
This (WIP) PR tries to propose some naming conventions. Entities:
atlas-: to designate an atlas this parcellation is partseg-: a name for the particular parcellation (e.g., number of networks or "aparc")scale-:(not used yet)designates granularity (e.g., for seg-17n one could have several scales depending on the number of ROIs).WDYT? @yasseraleman @effigies
@yasseraleman has a lot of other annot files that would go within this PR, once names look reasonable.(added for left hemisphere and will do so for right with enough thumbs-up)