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fix missing C2 in vald #316

fix missing C2 in vald

fix missing C2 in vald #316

Workflow file for this run

# For more information about TARDIS pipelines, please refer to:
#
# https://tardis-sn.github.io/tardis/development/continuous_integration.html
name: docs
on:
push:
branches:
- master
pull_request_target:
branches:
- master
types:
- opened
- reopened
- synchronize
- labeled # requires the `build-docs` label
workflow_dispatch: # manual trigger
schedule:
- cron: '0 0 * * 0' # run at midnight every Sunday
concurrency:
group: ${{ github.workflow }}-${{ github.head_ref || github.ref }}
cancel-in-progress: true
env:
XUVTOP: /tmp/chianti
CHIANTI_DL_URL: https://download.chiantidatabase.org
CHIANTI_DB_VER: CHIANTI_v9.0.1_database.tar.gz
CMFGEN_DL_URL: http://kookaburra.phyast.pitt.edu/hillier/cmfgen_files
CMFGEN_DB_VER: atomic_data_15nov16.tar.gz
DEPLOY_BRANCH: gh-pages # deployed docs branch
jobs:
build:
if: github.event_name == 'push' ||
github.event_name == 'workflow_dispatch' ||
(github.event_name == 'pull_request_target' &&
contains(github.event.pull_request.labels.*.name, 'build-docs'))
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
with:
fetch-depth: 0
- uses: actions/cache@v2
with:
path: ${{ env.XUVTOP }}
key: ${{ env.CHIANTI_DB_VER }}
id: chianti-cache
- name: Download Chianti database
run: |
mkdir -p ${{ env.XUVTOP }}
wget -q ${{ env.CHIANTI_DL_URL }}/${{ env.CHIANTI_DB_VER }} -O ${{ env.XUVTOP }}/chianti.tar.gz
tar -zxf ${{ env.XUVTOP }}/chianti.tar.gz -C ${{ env.XUVTOP }} --warning=none
if: steps.chianti-cache.outputs.cache-hit != 'true'
- uses: actions/cache@v2
with:
path: /tmp/atomic
key: ${{ env.CMFGEN_DB_VER }}
id: cmfgen-cache
- name: Download CMFGEN database
run: |
wget -q -U "Mozilla/4.0" ${{ env.CMFGEN_DL_URL }}/${{ env.CMFGEN_DB_VER }} -O /tmp/atomic.tar.gz
tar -zxf /tmp/atomic.tar.gz -C /tmp
if: steps.cmfgen-cache.outputs.cache-hit != 'true'
- uses: mamba-org/setup-micromamba@v1
with:
environment-file: conda-lock.yml
init-shell: bash
cache-environment: true
cache-downloads: true
environment-name: carsus
- name: Install package
shell: bash -l {0}
run: pip install -e .
- name: Build documentation
shell: bash -l {0}
run: cd docs/; make html
- name: Set destination directory
run: |
BRANCH=$(echo ${GITHUB_REF#refs/heads/})
if [[ $EVENT == push ]] || [[ $EVENT == workflow_dispatch ]]; then
if [[ $BRANCH == $DEFAULT ]]; then
echo "DEST_DIR=" >> $GITHUB_ENV
else
echo "DEST_DIR=branch/$BRANCH" >> $GITHUB_ENV
fi
elif [[ $EVENT == pull_request_target ]]; then
echo "DEST_DIR=pull/$PR" >> $GITHUB_ENV
else
echo "Unexpected event trigger $EVENT"
exit 1
fi
cat $GITHUB_ENV
env:
DEFAULT: ${{ github.event.repository.default_branch }}
EVENT: ${{ github.event_name }}
PR: ${{ github.event.number }}
- name: Set clean branch option
run: |
if [[ $EVENT == workflow_dispatch ]]; then
echo "CLEAN_BRANCH=true" >> $GITHUB_ENV
else
echo "CLEAN_BRANCH=false" >> $GITHUB_ENV
fi
cat $GITHUB_ENV
env:
EVENT: ${{ github.event_name }}
- name: Deploy ${{ env.DEST_DIR }}
uses: peaceiris/actions-gh-pages@v3
with:
github_token: ${{ secrets.GITHUB_TOKEN }}
publish_branch: ${{ env.DEPLOY_BRANCH }}
publish_dir: ./docs/_build/html
destination_dir: ${{ env.DEST_DIR }}
keep_files: true
force_orphan: ${{ env.CLEAN_BRANCH }}
user_name: 'Github Actions'
user_email: '41898282+github-actions[bot]@users.noreply.github.com'
- name: Find comment
uses: peter-evans/find-comment@v1
id: fc
with:
issue-number: ${{ github.event.number }}
body-includes: Hi, human.
if: always() && github.event_name == 'pull_request_target'
- name: Post comment (success)
uses: peter-evans/create-or-update-comment@v1
with:
token: ${{ secrets.GITHUB_TOKEN }}
issue-number: ${{ github.event.number }}
comment-id: ${{ steps.fc.outputs.comment-id }}
edit-mode: replace
body: |
*\*beep\* \*bop\**
Hi, human.
The **`${{ github.workflow }}`** workflow has **succeeded** :heavy_check_mark:
[**Click here**](${{ env.URL }}) to see your results.
env:
URL: https://${{ github.repository_owner }}.github.io/${{ github.event.repository.name }}/pull/${{ github.event.number }}/
if: success() && github.event_name == 'pull_request_target'
- name: Post comment (failure)
uses: peter-evans/create-or-update-comment@v1
with:
token: ${{ secrets.GITHUB_TOKEN }}
issue-number: ${{ github.event.number }}
comment-id: ${{ steps.fc.outputs.comment-id }}
edit-mode: replace
body: |
*\*beep\* \*bop\**
Hi, human.
The **`${{ github.workflow }}`** workflow has **failed** :x:
[**Click here**](${{ env.URL }}) to see the build log.
env:
URL: https://github.com/${{ github.repository_owner }}/${{ github.event.repository.name }}/actions/runs/${{ github.run_id }}?check_suite_focus=true
if: failure() && github.event_name == 'pull_request_target'