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nf-core / tools

Python package with helper tools for the nf-core community.

Python 240 188 Updated Oct 26, 2024

syy3354 / rna-seq-qc

Forked from maxplanck-ie/rna-seq-qc

Rna-seq pipeline, From FASTQ to differential expression analysis...

Python 1 Updated Mar 13, 2017

syy3354 / dna-me-pipeline

Forked from ENCODE-DCC/dna-me-pipeline

DCC/DAC methylation pipeline source

Perl 1 Updated Jul 29, 2020

syy3354 / wgbs-pipeline

Forked from ENCODE-DCC/wgbs-pipeline

ENCODE whole-genome bisulfite sequencing (WGBS) pipeline

Python 1 Updated Feb 15, 2022

syy3354 / syy3354

Config files for my GitHub profile.

1 Updated Dec 10, 2022

syy3354 / pipeline

Forked from shengqh/pipeline

bradner lab computation pipeline scripts

Python 1 Updated Jul 12, 2023

syy3354 / sy-wgbs_tools1

Forked from nloyfer/wgbs_tools

tools for working with Bisulfite Sequencing data while preserving reads intrinsic dependencies

Python 1 Updated Mar 18, 2024

ENCODE-DCC / dna-me-pipeline

DCC/DAC methylation pipeline source

Perl 55 26 Updated Jul 29, 2020

ENCODE-DCC / wgbs-pipeline

ENCODE whole-genome bisulfite sequencing (WGBS) pipeline

Python 29 14 Updated Feb 15, 2022

nloyfer / wgbs_tools

tools for working with Bisulfite Sequencing data while preserving reads intrinsic dependencies

Python 132 37 Updated Sep 17, 2024

yupenghe / methylpy

WGBS/NOMe-seq Data Processing & Differential Methylation Analysis

Python 135 47 Updated May 20, 2023

Gsllchb / Handright

A lightweight Python library for simulating Chinese handwriting

Python 2,019 247 Updated Apr 6, 2024