Setting correct path on each worker in parfor

surtfire · Apr 5, 2018 · 325bbec · 325bbec
1 parent f7117c2
commit 325bbec
Showing 1 changed file with 4 additions and 0 deletions.
diff --git a/src/analysis/FVA/fluxVariability.m b/src/analysis/FVA/fluxVariability.m
@@ -322,11 +322,13 @@
     lpsolver = CBT_LP_SOLVER;
     qpsolver = CBT_QP_SOLVER;
     milpsolver = CBT_MILP_SOLVER;
+    cpath = path;
     if minNorm        
         parfor i = 1:length(rxnNameList)
             changeCobraSolver(qpsolver,'QP',0,-1);
             changeCobraSolver(lpsolver,'LP',0,-1);
             changeCobraSolver(milpsolver,'MILP',0,-1);                
+            path(cpath);
             parLPproblem = LPproblem;        
             parLPproblem.osense = 1;
             [minFlux(i),Vmin(:,i)] = calcSolForEntry(model,rxnNameList,i,parLPproblem,1, method, allowLoops,printLevel,minNorm,cpxControl,preCompMinSols{i});
@@ -340,6 +342,7 @@
             changeCobraSolver(qpsolver,'QP',0,-1);
             changeCobraSolver(lpsolver,'LP',0,-1);
             changeCobraSolver(milpsolver,'MILP',0,-1);
+            path(cpath);
             parLPproblem = LPproblem;
             [mins(i)] = calcSolForEntry(model,rxnListMin,i,parLPproblem,1, method, allowLoops,printLevel,minNorm,cpxControl,[]);
         end
@@ -352,6 +355,7 @@
             changeCobraSolver(qpsolver,'QP',0,-1);
             changeCobraSolver(lpsolver,'LP',0,-1);
             changeCobraSolver(milpsolver,'MILP',0,-1);            
+            path(cpath);
             parLPproblem = LPproblem;
             [maxs(i)] = calcSolForEntry(model,rxnListMax,i,parLPproblem,1, method, allowLoops,printLevel,minNorm,cpxControl,[]);
         end