Skip to content

speed up using hashmaps #9

@suchapalaver

Description

@suchapalaver

writing a line per kmer is too inefficient and rarely needed. Much better to just return a vector of kmer hashmaps. Alternatively, make a hashmap containing n -> m pairs, where N is the number of time some kmer has been seen, and m the number of distinct kmers having been seen n times.

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions