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Merge pull request #140 from myushen/import-api-debug #551

Merge pull request #140 from myushen/import-api-debug

Merge pull request #140 from myushen/import-api-debug #551

Triggered via push May 22, 2024 03:34
Status Failure
Total duration 32m 6s
Artifacts 1

check-bioc.yml

on: push
Matrix: build-check
docker-build-and-push
0s
docker-build-and-push
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11 errors and 9 warnings
macOS-latest (4.3)
No such keg: /opt/homebrew/Cellar/r
macOS-latest (4.3)
Running examples in ‘CuratedAtlasQueryR-Ex.R’ failed
macOS-latest (4.3)
Invalid Input Error: File '/Users/runner/Library/Caches/org.R-project.R/R/CuratedAtlasQueryR/0.2.1/metadata.parquet' too small to be a Parquet file
macOS-latest (4.3)
Invalid Input Error: File '/Users/runner/Library/Caches/org.R-project.R/R/CuratedAtlasQueryR/0.2.1/metadata.parquet' too small to be a Parquet file
macOS-latest (4.3)
Invalid Input Error: File '/Users/runner/Library/Caches/org.R-project.R/R/CuratedAtlasQueryR/0.2.1/metadata.parquet' too small to be a Parquet file
macOS-latest (4.3)
Invalid Input Error: File '/Users/runner/Library/Caches/org.R-project.R/R/CuratedAtlasQueryR/0.2.1/metadata.parquet' too small to be a Parquet file
macOS-latest (4.3)
Invalid Input Error: File '/Users/runner/Library/Caches/org.R-project.R/R/CuratedAtlasQueryR/0.2.1/metadata.parquet' too small to be a Parquet file
macOS-latest (4.3)
Invalid Input Error: File '/Users/runner/Library/Caches/org.R-project.R/R/CuratedAtlasQueryR/0.2.1/metadata.parquet' too small to be a Parquet file
macOS-latest (4.3)
Invalid Input Error: File '/Users/runner/Library/Caches/org.R-project.R/R/CuratedAtlasQueryR/0.2.1/metadata.parquet' too small to be a Parquet file
macOS-latest (4.3)
Invalid Input Error: File '/Users/runner/Library/Caches/org.R-project.R/R/CuratedAtlasQueryR/0.2.1/metadata.parquet' too small to be a Parquet file
macOS-latest (4.3)
Invalid Input Error: File '/Users/runner/Library/Caches/org.R-project.R/R/CuratedAtlasQueryR/0.2.1/metadata.parquet' too small to be a Parquet file
macOS-latest (4.3)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/cache@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
macOS-latest (4.3)
harfbuzz 8.4.0 is already installed and up-to-date. To reinstall 8.4.0, run: brew reinstall harfbuzz
macOS-latest (4.3)
macOS's Gatekeeper has been disabled for this Cask
macOS-latest (4.3)
pkg-config 0.29.2_3 is already installed and up-to-date. To reinstall 0.29.2_3, run: brew reinstall pkg-config
macOS-latest (4.3)
HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK is set: not checking for outdated dependents or dependents with broken linkage!
macOS-latest (4.3)
Connection is garbage-collected, use dbDisconnect() to avoid this.
macOS-latest (4.3)
Connection is garbage-collected, use dbDisconnect() to avoid this.
ubuntu-latest (4.3)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/cache@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
windows-latest (4.3)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/cache@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Artifacts

Produced during runtime
Name Size
macOS-biocversion-devel-r-4.3-results Expired
3.01 MB