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khmer: new package @2.1.1 #42450

Merged
merged 5 commits into from
Feb 13, 2024
Merged

khmer: new package @2.1.1 #42450

merged 5 commits into from
Feb 13, 2024

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A-N-Other
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Adding khmer (program not a library, so no ^py-).

Has a very old dependency (bz2file) that was aimed at backporting bits of the bz2 stdlib. That's abandoned, so I didn't really want to add it in here - simpler just to just patch bz2file to bz2.

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spackbot-app bot commented Feb 2, 2024

Hi @A-N-Other! I noticed that the following package(s) don't yet have maintainers:

  • khmer

Are you interested in adopting any of these package(s)? If so, simply add the following to the package class:

    maintainers("A-N-Other")

If not, could you contact the developers of this package and see if they are interested? You can quickly see who has worked on a package with spack blame:

$ spack blame khmer

Thank you for your help! Please don't add maintainers without their consent.

You don't have to be a Spack expert or package developer in order to be a "maintainer," it just gives us a list of users willing to review PRs or debug issues relating to this package. A package can have multiple maintainers; just add a list of GitHub handles of anyone who wants to volunteer.

@A-N-Other
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@spackbot re-run pipeline

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spackbot-app bot commented Feb 12, 2024

I've started that pipeline for you!

A-N-Other and others added 2 commits February 13, 2024 16:21
Indeed!

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
@adamjstewart adamjstewart enabled auto-merge (squash) February 13, 2024 16:36
@adamjstewart adamjstewart merged commit d1e01d5 into spack:develop Feb 13, 2024
13 checks passed
@A-N-Other A-N-Other deleted the khmer branch February 14, 2024 09:15
mathomp4 pushed a commit to mathomp4/spack that referenced this pull request Mar 27, 2024
* khmer: new package @2.1.1

* rationalising patch

* adding dep, modifying patch

* Update var/spack/repos/builtin/packages/khmer/package.py

Indeed!

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* Update package.py

---------

Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
teaguesterling pushed a commit to teaguesterling/spack that referenced this pull request Jun 15, 2024
* khmer: new package @2.1.1

* rationalising patch

* adding dep, modifying patch

* Update var/spack/repos/builtin/packages/khmer/package.py

Indeed!

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* Update package.py

---------

Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
kwryankrattiger pushed a commit to kwryankrattiger/spack that referenced this pull request Jul 9, 2024
* khmer: new package @2.1.1

* rationalising patch

* adding dep, modifying patch

* Update var/spack/repos/builtin/packages/khmer/package.py

Indeed!

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* Update package.py

---------

Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
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3 participants