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Pull requests list

Added jupyter notebooks
#36 opened Aug 23, 2016 by anmwinter Loading… updated Aug 23, 2016
5 tasks
Added progress report to console when running sourmash compute with --singleton
#84 opened Jan 3, 2017 by lgautier Loading… updated Jan 21, 2017
3 of 5 tasks
11
[WIP] Improve signature save docstring; switch docstrings over to markdown
#921 opened Mar 28, 2020 by ctb Loading… updated Mar 28, 2020
5 tasks done
2
[EXP] C++ header using C API (generated from Rust) rust
#661 opened Mar 29, 2019 by luizirber Loading… updated May 12, 2020
5 tasks done
2
add DNA/protein check on first 100 bp of FASTA files
#1037 opened Jun 21, 2020 by ctb Loading… updated Jun 21, 2020
5 tasks
1
[WIP] JSON schema 4.0 issues to address for a 4.0 release
#578 opened Dec 14, 2018 by luizirber Loading… updated Aug 4, 2020
7 tasks
pre-4.0
3
[EXP] Build a storage plugin interface.
#1368 opened Mar 5, 2021 by ctb Loading… updated Apr 3, 2021
5 tasks
1
[WIP] Fix MinHash merge of abund + noabund objects (rust). rust
#1395 opened Mar 14, 2021 by ctb Loading… updated Apr 15, 2021
5 tasks
[WIP] Ertl estimators for scaled minhash
#1270 opened Jan 6, 2021 by luizirber Loading… updated May 6, 2021
7 tasks
1
[EXP] explore alternative MinHash constructors, and other things.
#1510 opened May 10, 2021 by ctb Loading… updated May 15, 2021
2
[WIP] Sphinx Panels
#1500 opened May 5, 2021 by josesanchez1815 Loading… updated May 25, 2021
10
[EXP] use codon degeneracy to properly translate edge amino acids if possible
#1579 opened Jun 10, 2021 by bluegenes Loading… updated Jun 10, 2021
1
[WIP] Adding some docstrings
#1583 opened Jun 11, 2021 by hehouts Loading… updated Jun 11, 2021
1
[WIP] Start documenting the Rust API
#1584 opened Jun 12, 2021 by luizirber Loading… updated Jun 12, 2021
1
[WIP] Updating developer information with docs building instructions
#1582 opened Jun 11, 2021 by mr-eyes Loading… updated Jun 17, 2021
12
[EXP] a simple JSON RPC client for sourmash search
#1644 opened Jun 27, 2021 by ctb Loading… updated Jul 5, 2021
1
[WIP] a demonstration of/documentation for some Storage functionality
#1758 opened Oct 20, 2021 by ctb Loading… updated Oct 27, 2021
1
[EXP] add an Index class that loads directly from a screed-loadable file
#1783 opened Jan 6, 2022 by ctb Loading… updated Jan 6, 2022
1
[EXP] Implement kmers_and_hashes in Rust
#1698 opened Aug 2, 2021 by mr-eyes Loading… updated Jan 20, 2022
2
[EXP] try out making a cover for the prefetch results
#1853 opened Feb 26, 2022 by ctb Loading… updated Feb 26, 2022
1
[EXP] Lazy signature loading classes that use manifests
#1619 opened Jun 21, 2021 by ctb Loading… updated Mar 25, 2022
2
[MRG] Updating citation and codemeta 4.0 issues to address for a 4.0 release
#837 opened Jan 9, 2020 by luizirber Loading… updated Apr 24, 2022
1 of 14 tasks
4.0
7
[WIP] add lca convert command
#2000 opened Apr 26, 2022 by ctb Loading… updated Apr 27, 2022
1
4
[EXP] minhash unique covered bp
#2027 opened May 3, 2022 by bluegenes Loading… updated May 12, 2022
6
[EXP] cache frozen properties
#2135 opened Jul 22, 2022 by ctb Loading… updated Jul 22, 2022
1
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