Implement unpaired alignment #398

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Dohyun-s wants to merge 12 commits intosokrypton:betafrom

Commits on Feb 6, 2023

solve file random ordering after mmseqs server
dohyun-s
committed

Commits on Feb 7, 2023

Merge branch 'beta' of https://github.com/sokrypton/ColabFold into beta
dohyun-s
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Merge branch 'beta' of https://github.com/sokrypton/ColabFold into beta
dohyun-s
committed

Commits on Feb 20, 2023

Merge remote-tracking branch 'sergey/beta' into beta
dohyun-s
committed
fix search.py
dohyun-s
committed

Commits on Feb 26, 2023

implement unpaired alignment && fix colabfold_search error
dohyun-s
committed

Commits on Mar 4, 2023

pad the msa input & fix jax compilation
dohyun-s
committed

Commits on Mar 8, 2023

Update max_msa_cluster in for inner loop
dohyun-s
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Commits on Mar 11, 2023

Fix wrong statement about db
dohyun-s
committed

Commits on Mar 19, 2023

update config to pass unpadded_seq_len & extra_msa to alphafold
dohyun-s
committed

Commits on Mar 21, 2023

Revert "Fix wrong statement about db"
dohyun-s
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Change run condition in interaction_scan
dohyun-s
committed