SpireDB `pairaln`

[KPHippe]

Hi,

I am running into an issue with pairaln on colabfold_search with multimers as input. I have downloaded the spiredb from the FTP site and extracted, and running on CPU with MMSEQS_IGNORE_INDEX=1 has gotten me almost to the end of the workflow. The current issue appears to be

INFO:colabfold.mmseqs.search:Running mmseqs pairaln tcr-pmhc-testrun/qdb /local/scratch/colabfold/NOGPU_databases/spire_ctg10_2401_db tcr-pmhc-testrun/res_exp_realign tcr-pmhc-testrun/res_exp_realign_pair --db-load-mode 0 --pairing-mode 0 --pairing-dummy-mode 0 --threads 64
pairaln tcr-pmhc-testrun/qdb /local/scratch/colabfold/NOGPU_databases/spire_ctg10_2401_db tcr-pmhc-testrun/res_exp_realign tcr-pmhc-testrun/res_exp_realign_pair --db-load-mode 0 --pairing-mode 0 --pairing-dummy-mode 0 --threads 64

Input taxonomy database "/local/scratch/colabfold/NOGPU_databases/spire_ctg10_2401_db" is missing files:
- /local/scratch/colabfold/NOGPU_databases/spire_ctg10_2401_db_mapping
- /local/scratch/colabfold/NOGPU_databases/spire_ctg10_2401_db_nodes.dmp
- /local/scratch/colabfold/NOGPU_databases/spire_ctg10_2401_db_names.dmp
- /local/scratch/colabfold/NOGPU_databases/spire_ctg10_2401_db_merged.dmp

What do I need to do to fix this? Thanks!