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Investigate Metabonaut LC-MS data

Status: Open.

#847 In sneumann/xcms;

· jorainer opened on Sep 1, 2026

Build / check failure on Linux / macOS:

Status: Open.

#845 In sneumann/xcms;

· sneumann opened on Aug 24, 2026

Integrate lcmsPlot as an alternative plotting backend for xcms

Status: Open.

#844 In sneumann/xcms;

· oss6 opened on Aug 7, 2026

CentWaveParam(roiList=...) uses scan indices only — shared ROIs break across files with different MS1 scan counts / rates

Status: Open.

#838 In sneumann/xcms;

· DrRuiLi opened on Jul 27, 2026

Add support for the new Chromatograms package

enhancement

Status: Open.

#836 In sneumann/xcms;

· jorainer opened on Jul 22, 2026

chromPeaks(mz, rt) and filterMz()/filterRt() outputs don't match

Status: Open.

#833 In sneumann/xcms;

· jmorim opened on May 22, 2026

CentWavePredIsoParam assumes Carbon isotopes only; lacks support for N/O isotopes

Status: Open.

#830 In sneumann/xcms;

· DrRuiLi opened on Mar 24, 2026

refineChromPeaks,MergeNeighboringPeaksParam fails to merge nested peaks

bug

Status: Open.

#825 In sneumann/xcms;

· jorainer opened on Feb 6, 2026

Remove dependency on msdata

Status: Open.

#824 In sneumann/xcms;

· jorainer opened on Feb 4, 2026

Disable ProgressBar when running xcms::chromatogram

Status: Open.

#817 In sneumann/xcms;

· hhabra opened on Sep 26, 2025

Have a "refineFeatures" method

enhancement

Status: Open.

#813 In sneumann/xcms;

· jorainer opened on Sep 10, 2025

Issue with the .plotChromPeakDensity function?

Status: Open.

#812 In sneumann/xcms;

· melpetera opened on Sep 3, 2025