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Commits on Dec 18, 2024

• fix: handle NA values correctly in meta compare pathways (#134)

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Commits on Dec 17, 2024

• refactor: Add kallisto parameter validation for 3' prime experiments in units sheet (#132)

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• refactor: Redirect stderr to log file for easier debugging (#133)

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Commits on Dec 11, 2024

• fix: use latest stable datavzrd, fixing a bug with numpy values in configs; increase default ensembl release version to 113 (112 currently has biomart issues) (#130)

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Commits on Nov 5, 2024

• fix: Update to latest datavzrd wrapper (#126)

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Commits on Oct 18, 2024

• fix: Update max in memory rows for diffexp report (#122)

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• perf: Update to latest datavzrd wrapper (#125)

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• fix: Move NA values to end of table (#124)

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Commits on Oct 17, 2024

• fix: Convert pval and qval to heatmap (#123)

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Commits on Sep 26, 2024

• perf: Update to latest datavzrd wrapper version (#120)

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Commits on Sep 20, 2024

• perf: Update datavzrd wrapper version (#118)

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Commits on Sep 11, 2024

• refactor: Refactor meta comparison (#114)

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• fix: Fix meta comparison and wildcard issue (#113)

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Commits on Aug 29, 2024

• fix: Fix meta comparison model and label path (#111)

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Commits on Aug 22, 2024

• fix: Move signed_pi_value_* columns into detail mode that dont include the primary variable (#110)

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• fix: Update datavzrd wrapper version (#109)

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Commits on Aug 20, 2024

• fix: Move signed_pi_value_* columns to the end and move non primary variable columns to detail mode (#106)

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• fix: Remove IHW outputs from report (#107)

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Commits on Aug 5, 2024

• fix: Handle missing bam columns in units.tsv (#105)

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Commits on Jul 17, 2024

• docs: Fix units configuration docs for bam files (#104)

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Commits on Jun 25, 2024

• fix: Fix missing output in spia.R when no significant genes are found (#103)

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• fix: Remove non-existent outputs in spia rule (#102)

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Commits on Jun 24, 2024

• perf: Update samtools fast separate wrapper (#100)

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• perf: Update datavzrd wrapper (#98)

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Commits on Jun 5, 2024

• feat: Allow bam input files (#94)

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Commits on May 29, 2024

• ci: Add fetch-depth: 0 to linting job (#95)

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