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Type-check Pandas code and require newer pyarrow.
- Pandas now has canonical type stubs, which mypy can find and install. - We no longer support py3.7, so we don't need the pyarrow hotfix. - Type annotation fix related to installing Pandas stubs.
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@@ -1,19 +1,18 @@ | ||
anndata==0.10.5.post1 | ||
array_api_compat==1.4.1 | ||
anndata==0.10.7 | ||
array_api_compat==1.7.1 | ||
attrs==23.2.0 | ||
exceptiongroup==1.2.0 | ||
h5py==3.10.0 | ||
llvmlite==0.42.0 | ||
exceptiongroup==1.2.1 | ||
h5py==3.11.0 | ||
llvmlite==0.43.0 | ||
natsort==8.4.0 | ||
numba==0.59.0 | ||
numpy==1.26.4 | ||
packaging==23.2 | ||
pandas==2.2.0 | ||
pyarrow==15.0.0 | ||
pyarrow-hotfix==0.6 | ||
python-dateutil==2.8.2 | ||
numba==0.60.0 | ||
numpy==2.0.0 | ||
packaging==24.1 | ||
pandas==2.2.2 | ||
pyarrow==16.1.0 | ||
python-dateutil==2.9.0.post0 | ||
pytz==2024.1 | ||
scipy==1.12.0 | ||
scipy==1.13.1 | ||
six==1.16.0 | ||
typing_extensions==4.9.0 | ||
typing_extensions==4.12.2 | ||
tzdata==2024.1 |
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Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -1,18 +1,17 @@ | ||
anndata==0.10.5.post1 | ||
array_api_compat==1.4.1 | ||
anndata==0.10.7 | ||
array_api_compat==1.7.1 | ||
attrs==23.2.0 | ||
h5py==3.10.0 | ||
llvmlite==0.42.0 | ||
h5py==3.11.0 | ||
llvmlite==0.43.0 | ||
natsort==8.4.0 | ||
numba==0.59.0 | ||
numpy==1.26.4 | ||
packaging==23.2 | ||
pandas==2.2.0 | ||
pyarrow==15.0.0 | ||
pyarrow-hotfix==0.6 | ||
python-dateutil==2.8.2 | ||
numba==0.60.0 | ||
numpy==2.0.0 | ||
packaging==24.1 | ||
pandas==2.2.2 | ||
pyarrow==16.1.0 | ||
python-dateutil==2.9.0.post0 | ||
pytz==2024.1 | ||
scipy==1.12.0 | ||
scipy==1.13.1 | ||
six==1.16.0 | ||
typing_extensions==4.9.0 | ||
typing_extensions==4.12.2 | ||
tzdata==2024.1 |
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Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -1,20 +1,19 @@ | ||
anndata==0.10.5.post1 | ||
array_api_compat==1.4.1 | ||
anndata==0.10.7 | ||
array_api_compat==1.7.1 | ||
attrs==23.2.0 | ||
h5py==3.10.0 | ||
llvmlite==0.42.0 | ||
h5py==3.11.0 | ||
llvmlite==0.43.0 | ||
natsort==8.4.0 | ||
numba==0.59.0 | ||
numpy==1.26.4 | ||
packaging==23.2 | ||
pandas==2.2.0 | ||
pyarrow==15.0.0 | ||
pyarrow-hotfix==0.6 | ||
python-dateutil==2.8.2 | ||
numba==0.60.0 | ||
numpy==2.0.0 | ||
packaging==24.1 | ||
pandas==2.2.2 | ||
pyarrow==16.1.0 | ||
python-dateutil==2.9.0.post0 | ||
pytz==2024.1 | ||
scipy==1.12.0 | ||
setuptools==69.0.3 | ||
scipy==1.13.1 | ||
setuptools==70.0.0 | ||
six==1.16.0 | ||
typing_extensions==4.9.0 | ||
typing_extensions==4.12.2 | ||
tzdata==2024.1 | ||
wheel==0.42.0 | ||
wheel==0.43.0 |
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Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -1,36 +1,36 @@ | ||
anndata==0.9.2 | ||
attrs==23.2.0 | ||
black==24.2.0 | ||
black==24.4.2 | ||
cfgv==3.4.0 | ||
click==8.1.7 | ||
distlib==0.3.8 | ||
filelock==3.13.1 | ||
h5py==3.10.0 | ||
identify==2.5.34 | ||
importlib-metadata==7.0.1 | ||
filelock==3.15.1 | ||
h5py==3.11.0 | ||
identify==2.5.36 | ||
importlib_metadata==7.1.0 | ||
isort==5.13.2 | ||
llvmlite==0.41.1 | ||
mypy==1.8.0 | ||
mypy==1.10.0 | ||
mypy-extensions==1.0.0 | ||
natsort==8.4.0 | ||
nodeenv==1.8.0 | ||
nodeenv==1.9.1 | ||
numba==0.58.1 | ||
numpy==1.24.4 | ||
packaging==23.2 | ||
packaging==24.1 | ||
pandas==2.0.3 | ||
pathspec==0.12.1 | ||
platformdirs==4.2.0 | ||
platformdirs==4.2.2 | ||
pre-commit==3.5.0 | ||
pyarrow==15.0.0 | ||
pyarrow==16.1.0 | ||
pyarrow-hotfix==0.6 | ||
python-dateutil==2.8.2 | ||
python-dateutil==2.9.0.post0 | ||
pytz==2024.1 | ||
PyYAML==6.0.1 | ||
ruff==0.2.1 | ||
ruff==0.4.9 | ||
scipy==1.10.1 | ||
six==1.16.0 | ||
tomli==2.0.1 | ||
typing_extensions==4.9.0 | ||
typing_extensions==4.12.2 | ||
tzdata==2024.1 | ||
virtualenv==20.25.0 | ||
zipp==3.17.0 | ||
virtualenv==20.26.2 | ||
zipp==3.19.2 |
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Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -1,19 +1,18 @@ | ||
anndata==0.9.2 | ||
attrs==23.2.0 | ||
h5py==3.10.0 | ||
importlib-metadata==7.0.1 | ||
h5py==3.11.0 | ||
importlib_metadata==7.1.0 | ||
llvmlite==0.41.1 | ||
natsort==8.4.0 | ||
numba==0.58.1 | ||
numpy==1.24.4 | ||
packaging==23.2 | ||
packaging==24.1 | ||
pandas==2.0.3 | ||
pyarrow==15.0.0 | ||
pyarrow-hotfix==0.6 | ||
python-dateutil==2.8.2 | ||
pyarrow==16.1.0 | ||
python-dateutil==2.9.0.post0 | ||
pytz==2024.1 | ||
scipy==1.10.1 | ||
six==1.16.0 | ||
typing_extensions==4.9.0 | ||
typing_extensions==4.12.2 | ||
tzdata==2024.1 | ||
zipp==3.17.0 | ||
zipp==3.19.2 |
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Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -1,23 +1,22 @@ | ||
anndata==0.10.5.post1 | ||
array_api_compat==1.4.1 | ||
anndata==0.10.7 | ||
array_api_compat==1.7.1 | ||
attrs==23.2.0 | ||
docutils==0.16 | ||
exceptiongroup==1.2.0 | ||
h5py==3.10.0 | ||
exceptiongroup==1.2.1 | ||
h5py==3.11.0 | ||
jmespath==1.0.1 | ||
llvmlite==0.42.0 | ||
llvmlite==0.43.0 | ||
natsort==8.4.0 | ||
numba==0.59.0 | ||
numpy==1.26.4 | ||
packaging==23.2 | ||
pandas==2.2.0 | ||
pyarrow==15.0.0 | ||
pyarrow-hotfix==0.6 | ||
numba==0.60.0 | ||
numpy==2.0.0 | ||
packaging==24.1 | ||
pandas==2.2.2 | ||
pyarrow==16.1.0 | ||
python-dateutil==2.8.2 | ||
pytz==2024.1 | ||
rsa==4.7.2 | ||
s3transfer==0.6.0 | ||
scipy==1.12.0 | ||
scipy==1.13.1 | ||
six==1.16.0 | ||
typing_extensions==4.9.0 | ||
typing_extensions==4.12.2 | ||
tzdata==2024.1 |
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