polarization covariances (all) #356
Workflow file for this run
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| name: Testing | |
| on: | |
| pull_request: | |
| push: | |
| branches: [master] | |
| jobs: | |
| build: | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| matrix: | |
| os: [ubuntu-latest, macos-latest] | |
| python-version: ["3.8", "3.9", "3.10", "3.11"] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Set gfortran link on macos-latest | |
| if: matrix.os == 'macos-latest' | |
| run: | | |
| set -x | |
| sudo ln -s /usr/local/bin/gfortran-11 /usr/local/bin/gfortran | |
| gfortran --version | |
| - name: Install via pip | |
| run: | | |
| python -m pip install --upgrade pip wheel | |
| python -m pip install numpy pytest pytest-cov | |
| python -m pip install -e . | |
| python -m pip install pixell==0.17.3 | |
| - name: Install extra dependencies (camb) | |
| run: | | |
| python -m pip install camb | |
| - name: Download test data | |
| run: | | |
| wget https://github.com/xzackli/pspy/releases/download/v.test/example_newcov.zip | |
| unzip example_newcov.zip | |
| mv example_newcov pspy/tests/data/ | |
| - name: Unit tests | |
| run: | | |
| pytest -vv pspy --cov=pspy --cov-report=xml:coverage.xml --ignore=pspy/tests/test_pspy_namaster.py | |
| - name: Report Coverage (codecov) | |
| if: matrix.os == 'ubuntu-latest' | |
| uses: codecov/codecov-action@v3 | |
| - name: Test notebooks (Only on Linux for saving time) | |
| if: matrix.os == 'ubuntu-latest' | |
| run: | | |
| python -m pip install jupyter | |
| # jupyter nbconvert --to notebook --execute notebooks/tutorial_io.ipynb | |
| - name: Comparing pspy to NaMaster | |
| if: matrix.os == 'ubuntu-latest' | |
| run: | | |
| sudo apt-get install -y libcfitsio-dev libfftw3-dev | |
| python -m pip install pymaster | |
| python -m unittest pspy/tests/test_pspy_namaster.py |