Portfolio

This is a repository containing projects I have completed with various online courses, and by myself. All projects are written in Python Jupyter Notebooks, unless stated otherwise.

Contents

• Bioinformatics

  • Gene Finder: A program to convert GenBank data into easy-to-read gene tables.
  • gRNA Generator: A high throughput script to generate CRISPR Cas9 guide RNA molecules.

• Data Visualization

  • Climate Data Visualization: Coursera's Applied Plotting, Charting & Data Representation in Python final assignment that describes climate trends in Ann Arbor, MI

• Dynamical System Modeling

  • True Lorenz System Approximation: A notebook showcasing the modeling of a non-linear dynamical system, and the regression of synthetically generated data.

• Machine Learning

  • Predicting protein type from X-ray diffraction data: A machine learning project from my undergraduate Introduction to Machine Learning class in R utilizing tidyverse and tidymodels. Note: Source code is provided in this repository, but the link will direct to a website hosting the final report.

• Other

  • DiffCoEx: A class project which uses Go to speed up data preprocessing and significance testing with parallelization.