On branch master

PyLOH.py, run_model.py: --priors_file_name -> --priors
sejooning · Sep 30, 2013 · 7a3fd3e · 7a3fd3e
1 parent c245d49
commit 7a3fd3e
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Showing 2 changed files with 2 additions and 2 deletions.
diff --git a/PyLOH.py b/PyLOH.py
@@ -72,7 +72,7 @@
 parser_run_model.add_argument('--allele_number_max', default=2, type=int,
                             help='''Maximum copy number of each allele allows to take. Default is 2.''')
 
-parser_run_model.add_argument('--priors_file_name', default=None, type=str,
+parser_run_model.add_argument('--priors', default=None, type=str,
                              help='''File of the prior distribution. If not provided,
                                 use uniform prior. Default is None.''')
 

diff --git a/pyloh/model/run_model.py b/pyloh/model/run_model.py
@@ -17,7 +17,7 @@ def run_poisson_model(args):
     restart_num = len(restart_parameters_list)
 
     model = PoissonProbabilisticModel(args.allele_number_max)
-    model.read_priors(args.priors_file_name)
+    model.read_priors(args.priors)
     model.read_data(args.filename_base)
     model.preprocess()