Bump networkx from 3.4.2 to 3.5

[dependabot]

Bumps networkx from 3.4.2 to 3.5.

Release notes

Sourced from networkx's releases.

NetworkX 3.5

networkx 3.5

We're happy to announce the release of networkx 3.5!

API Changes

• Save Layouts on Graphs (#7571).
• Expire d_separated and minimum_d_separator functions (#7830).
• Expire all_triplets deprecation (#7828).
• Expire random_triad deprecation (#7829).
• DEP: Raise an exception for k_core functions with multigraphs (#7831).
• Deprecate graph_could_be_isomorphic (#7826).
• Expire total_spanning_tree_weight deprecation (#7843).
• Expire deprecation of create kwarg in nonisomorphic_trees (#7847).
• New draw API (#7589).

Enhancements

• perf: optimise random_k_out_graph (#7702).
• Clausets local community detection algorithm (#7691).
• find_asteroidal_triple improvement (#7736).
• Add weight to harmonic_diameter (#7636).
• Densest Subgraph Problem: Greedy Peeling and Greedy++ Implementations (#7731).
• single_source_all_shortest_paths: don't loop over all nodes (#7762).
• Error message improvement for nbunch_iter ( NetworkXError raised with specific message on TypeError with "iter" in msg ) (#7790).
• Faster computation of energy in Laplacian centrality (#7793).
• Make forceatlas2_layout dispatchable (#7794).
• Update dispatchable for forceatlas2_layout (#7798).
• Enable backend-only functions where NetworkX is just an API (#7690).
• Steinertree kou enhancement in response to issue 5889 type:Enhancements (#7767).
• Add Leiden as a backend-only algorithm (#7743).
• Bipartite layout nodes optional (#7756).
• Densest Subgraph Problem: FISTA based algorithm + Large scale tests (#7770).
• Dispatch get_node_attributes and a few more from nx.classes.function (#7824).
• Faster could_be_isomorphic and number_of_cliques (#7855).
• Add square_clustering to algorithm benchmarks (#7857).
• Faster Implementation of Structural Holes (#7249).
• Improve runtime of number_of_nonisomorphic_trees() (#7917).
• Fix write_gexf timeformat for dynamic Graphs (#7914).
• Consolidate could_be_isomorphic (#7852).
• Improving rooted_tree_isomorphism for deep trees (#7945).
• Fixing nx.diameter inconsistent results with usebounds=True (#7954).
• Faster square_clustering (#7810).
• Avoid repeated cache conversion failures for backends (#7768).
• Improve _sparse_fruchterman_reingold with L-BFGS (#7889).
• Improve Performance of Tree Isomorphism and Center Calculation (#7946).
• Add option for biadjacency_matrix to be returned as a dense NumPy array (#7973).
• Add Functions for Finding Connected Dominating Sets (#7774).
• Add feature to make storing node contraction data optional (#7902).

... (truncated)

Commits

• 4fa222d Designate 3.5 release
• 9fd0532 Fix typo in min_edge_cover docstring (#8075)
• fc67a54 Clarify subgraph node/edge order is not preserved (#8069)
• 7c97a10 Minor refactor to cleanup/improve matching test suite (#8068)
• 9e33b11 Fix edge case in ISMAGS symmetry detection (#8055)
• 5f06a49 Add note about cycles in maximum_flow() (#8058)
• 6791918 TST: Minor improvements to layout test suite (#8049)
• 2bbd7a4 STY: Rm local variable remapping of heappush and heappop. (#8051)
• dc8de3b fix bug of _sparse_fruchterman_reingold and remove try/except idiom (#8041)
• 335fe23 Add a new gallery spring layout (#8042)
• Additional commits viewable in compare view

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