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Formatting

  • My tutorial has only one top-level (#) header

Reproducibility

  • My tutorial works on Google Colab
  • My tutorial sets scvi.settings.seed = 0 at the beginning of the notebook
  • My tutorial has been run and includes outputs (e.g. plots, tables)

Other

  • Counts and normalized data should co-exist in the datasets, see the API overview for an example
  • For scRNA-seq data, normalization should be counts per median library size and then log1p transformed -- if not, a reason should be given

@ori-kron-wis ori-kron-wis added this to the scvi-tutorials 1.3.0 milestone Mar 13, 2025
@ori-kron-wis ori-kron-wis self-assigned this Mar 13, 2025
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@ori-kron-wis ori-kron-wis merged commit 7c43ad2 into main Mar 13, 2025
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@ori-kron-wis ori-kron-wis deleted the Ori-update-intrep-with-fastshap branch March 13, 2025 16:04
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