How to do `Slingshot` trajectory inference using anndata and `scanpy`?

[danli349]

What kind of feature would you like to request?

Additional function parameters / changed functionality / changed defaults?

Please describe your wishes

Hello:

Is there a tutorial about how to perform Slingshot trajectory Inference using anndata and scanpy?
Thanks a lot
https://bioconductor.org/packages/devel/bioc/vignettes/slingshot/inst/doc/vignette.html

[flying-sheep]

Seems like there is this project: https://github.com/mossjacob/pyslingshot

Scanpy has https://scanpy.readthedocs.io/en/stable/generated/scanpy.tl.dpt.html

I hope that answers your question, feel free to respond!

[danli349]

@flying-sheep Thanks a lot