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  • 🧬 Generative modeling of regulatory DNA sequences with diffusion probabilistic models 💨

    Python Other Updated Jan 7, 2025
  • ipknot Public

    Integer programming based prediction of RNA secondary structures with pseudoknots

    C++ 18 10 GNU General Public License v3.0 Updated Jun 6, 2024
  • ractip Public

    RNA-RNA interaction prediction by integer programming

    C++ 1 1 Updated Jun 10, 2023
  • forna Public

    Forked from mmferrari/forna

    Create force-directed graphs of RNA secondary structures.

    JavaScript Apache License 2.0 Updated Mar 2, 2023
  • dafs Public

    dual decomposition for aligning and folding RNA sequences simultaneously

    C++ 1 GNU General Public License v3.0 Updated Feb 11, 2022
  • practip Public

    Protein-RNA interaction prediction using integer programming

    C++ 2 1 GNU General Public License v3.0 Updated Oct 2, 2021
  • Centroid RNA package

    C++ 19 6 GNU General Public License v2.0 Updated Oct 12, 2020
  • A free and open source online judge system for programming courses

    PHP GNU General Public License v3.0 Updated Sep 25, 2020
  • simplesnap Public

    Forked from jgoerzen/simplesnap

    A simple and powerful way to send ZFS snapshots across a network

    Shell GNU General Public License v3.0 Updated Jan 25, 2019
  • formulas for RNA informatics tools

    Ruby 1 Updated Feb 11, 2016