Updates version to 1.3.4

samhorsfield96 · Mar 28, 2023 · 488bc0d · 488bc0d
1 parent e1ce856
commit 488bc0d
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Showing 6 changed files with 6 additions and 6 deletions.
diff --git a/.github/workflows/python-package-conda.yml b/.github/workflows/python-package-conda.yml
@@ -11,7 +11,7 @@ jobs:
     runs-on: ubuntu-20.04
     strategy:
       matrix:
-        python-version: [3.8]
+        python-version: [3.9]
 
     steps:
     - name: checkout source
@@ -46,7 +46,7 @@ jobs:
     runs-on: macos-latest
     strategy:
       matrix:
-        python-version: [3.8]
+        python-version: [3.9]
 
     steps:
     - name: checkout source

diff --git a/CMakeLists.txt b/CMakeLists.txt
@@ -64,8 +64,6 @@ SET( tbb_LIBRARIES ${tbb_LIBRARY} )
 find_package(MKL)
 #SET(MKL_LIBRARIES)
 #list(APPEND MKL_LIBRARIES ${MKL_LIBRARY})
-MESSAGE(${MKL_LIBRARIES})
-MESSAGE(${MKL_INCLUDE_DIR})
 FIND_PACKAGE_HANDLE_STANDARD_ARGS(MKL DEFAULT_MSG MKL_INCLUDE_DIR MKL_LIBRARIES)
 # avoid local MKL when looking for pytorch
 #SET(MKL_FOUND TRUE)

diff --git a/cmake/FindMKL.cmake b/cmake/FindMKL.cmake
@@ -49,7 +49,7 @@ set(INTEL_ROOT ${INTEL_ROOT_DEFAULT} CACHE PATH "Folder contains intel libs")
 find_path(MKL_ROOT include/mkl.h PATHS $ENV{MKLROOT} ${INTEL_ROOT}/mkl $ENV{CONDA_PREFIX}
                                    DOC "Folder contains MKL")
 
-MESSAGE(${MKL_ROOT})
+#MESSAGE(${MKL_ROOT})
 
 find_path(MKL_INCLUDE_DIR NAMES mkl.h HINTS ${MKL_ROOT}/include /usr/include/mkl $ENV{CONDA_PREFIX}/include)
 

diff --git a/environment_linux.yml b/environment_linux.yml
@@ -4,6 +4,7 @@ channels:
   - bioconda
   - defaults
 dependencies:
+  - python>=3.9
   - pytorch-cpu=1.10
   - mkl-devel
   - tbb-devel

diff --git a/environment_macOS.yml b/environment_macOS.yml
@@ -4,6 +4,7 @@ channels:
   - bioconda
   - defaults
 dependencies:
+  - python>=3.9
   - pytorch-cpu=1.10
   - mkl-devel
   - tbb-devel

diff --git a/ggCaller/__init__.py b/ggCaller/__init__.py
@@ -2,4 +2,4 @@
 
 '''ggCaller: a gene caller for Bifrost graphs'''
 
-__version__ = '1.3.3'
+__version__ = '1.3.4'
Original file line number	Diff line number	Diff line change
Expand Up		@@ -2,4 +2,4 @@

		'''ggCaller: a gene caller for Bifrost graphs'''

		__version__ = '1.3.3'
		__version__ = '1.3.4'