Contour Transformer Network for One-shot Segmentation of Anatomical Structures

This repository is for the experiment data of the paper "Contour Transformer Network for One-shot Segmentation of Anatomical Structures", IEEE Transactions on Medical Imaging, 2020. (PDF)

If you have any question about this paper, please feel free to contact me at yuhang@email.sc.edu.

(Our method trained with only one label achieves comparable performance with fully supervised alternatives.)

Knee dataset

Please download the original knee X-ray images from the OAI dataset.

Image list: knee_img_list.json

Segmentation masks: knee_data

Lung dataset

Please download the original lung images and ground truth segmentations from the SCR dataset.

Image list: lung_img_list.json

Phalanx dataset

The phalanx dataset is not publicly available for now.

Hip dataset

Please download the original hip X-ray images from the OAI dataset.

Image list: hip_img_list.json

Segmentation masks: hip_data

Citation

@article{lu2020contour,
  title={Contour Transformer Network for One-shot Segmentation of Anatomical Structures},
  author={Lu, Yuhang and Zheng, Kang and Li, Weijian and Wang, Yirui and Harrison, Adam P and Lin, Chihung and Wang, Song and Xiao, Jing and Lu, Le and Kuo, Chang-Fu and Miao, Shun},
  journal={arXiv preprint arXiv:2012.01480},
  year={2020}
}