Getting rid of examples for internal functions.

DESCRIPTION

@@ -1,7 +1,7 @@
 Package: occCite
 Type: Package
-Title: Tools for Querying and Managing Large Biodiversity Occurrence Datasets
-Version: 0.2.0
+Title: Querying and Managing Large Biodiversity Occurrence Datasets
+Version: 0.3.0
 Authors@R: c(
   person("Hannah L.","Owens", ,"hannah.owens@gmail.com", role=c("aut","cre"),
     comment = c(ORCID = "0000-0003-0071-1745")),

NEWS.md

@@ -1,3 +1,8 @@
+# occCite 0.3.0
+
+*Updated to meet CRAN reviewer guidelines
+*Citations now include packages used.
+
 # occCite 0.2.0
 
 * Updated to reflect new object structures returned by searches with update `rgbif`, version 3.1.

R/GBIFtableCleanup.R

@@ -9,15 +9,6 @@
 #' @return A data.frame tidied for compatibility with
 #' \code{\link{getBIENpoints}} results.
 #'
-#' @examples
-#' \dontrun{
-#' ##If you have already created a occCite object, and have not previously
-#' temp <- getGBIFpoints(taxon = "Protea cynaroides", GBIFLogin = GBIFLogin,
-#'                       GBIFDownloadDirectory = GBIFDownloadDirectory,
-#'                       checkPreviousGBIFDownload = checkPreviousGBIFDownload)
-#' fitForUseTable <- GBIFtableCleanup(temp$OccurrenceTable)
-#'}
-#'
 #' @keywords internal
 
 GBIFtableCleanup <- function(GBIFtable){

R/gbifRetriever.R

@@ -13,10 +13,6 @@
 #' data; (2) GBIF search metadata for every GBIF download in the
 #' specified directory.
 #'
-#' @examples
-#' \dontrun{
-#' gbifRetriever("Protea cynaroides")
-#' }
 #' @keywords internal
 
 gbifRetriever <- function (taxon = NULL){

R/occCite_plotting.R

@@ -10,13 +10,6 @@
 #' @return A table that can be more easily mapped and used
 #' for summary plots.
 #'
-#' @examples
-#' \dontrun{
-#' data(myOccCiteObject)
-#' tableForPlot <- tabulate.occResults(myOccCiteObject@occResults$`Protea cynaroides`,
-#'                                     "Protea cynaroides")
-#' }
-#'
 #' @keywords internal
 #'
 tabulate.occResults <- function(x, sp.name) {

R/tabGBIF.R

@@ -13,13 +13,6 @@
 #' occurrence data  \item GBIF search metadata for every GBIF download in
 #' the specified directory.}
 #'
-#' @examples
-#' \dontrun{
-#' res <- rgbif::as.download(system.file("extdata/Protea_cynaroides",
-#'                  "0012335-190621201848488.zip",
-#'             package = "occCite"))
-#' tabGBIF(GBIFresults = res, taxon = "Protea cynaroides")
-#' }
 #' @keywords internal
 
 tabGBIF <- function(GBIFresults, taxon){