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Prepare for release
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robomics committed Feb 26, 2023
1 parent 0cb5d26 commit 5709ee2
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6 changes: 3 additions & 3 deletions README.md
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Expand Up @@ -134,11 +134,11 @@ user@dev:/tmp$ nextflow run --sample_sheet=samplesheet.tsv \
--assembly_gaps=data/gaps.txt.gz \
--outdir=data/results/ \
https://github.com/robomics/call_tad_cliques \
-r v1.1.0 \
-r v0.2.0 \
-with-singularity # Replace this with -with-docker to use Docker instead

N E X T F L O W ~ version 22.10.7
Launching `https://github.com/robomics/call_tad_cliques` [focused_bohr] DSL2 - revision: 9a02af259a [v1.1.0]
Launching `https://github.com/robomics/call_tad_cliques` [focused_bohr] DSL2 - revision: 9a02af259a [v0.2.0]
executor > local (16)
[71/d00e78] process > check_sample_sheet [100%] 1 of 1 ✔
[ad/a7b3ba] process > process_sample_sheet [100%] 1 of 1 ✔
Expand Down Expand Up @@ -192,7 +192,7 @@ If you get permission errors when using `-with-docker`:

If you get an error similar to:
```
Cannot find revision `v1.1.0` -- Make sure that it exists in the remote repository `https://github.com/robomics/call_tad_cliques`
Cannot find revision `v0.2.0` -- Make sure that it exists in the remote repository `https://github.com/robomics/call_tad_cliques`
```

try to remove folder `~/.nextflow/assets/robomics/call_tad_cliques` before running the workflow
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2 changes: 1 addition & 1 deletion nextflow.config
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Expand Up @@ -24,5 +24,5 @@ params {
}

process {
container = 'ghcr.io/robomics/call_tad_cliques:0.1.0'
container = 'ghcr.io/robomics/call_tad_cliques:0.2.0'
}

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