fix tests for accessory fasta

riyeyan · Nov 26, 2015 · 10bd531 · 10bd531
1 parent 84961ad
commit 10bd531
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Showing 2 changed files with 5 additions and 5 deletions.
diff --git a/t/Bio/Roary/AccessoryBinaryFasta.t b/t/Bio/Roary/AccessoryBinaryFasta.t
@@ -28,10 +28,10 @@ ok(
         input_files => [ 't/abc/aaa', 't/abc/bbb', 't/abc/ccc', 't/abc/ddd' ],
         groups_to_files => 
 		{
-            group_1 => { 'aaa' => [1] },
-            group_2 => { 'aaa' => [1], 'bbb' => [2] },
-            group_3 => { 'aaa' => [1], 'bbb' => [2], 'ccc' => [3] },
-            group_4 => { 'aaa' => [1], 'bbb' => [2], 'ccc' => [3], 'ddd' => [4] },
+            group_1 => { 't/abc/aaa' => [1] },
+            group_2 => { 't/abc/aaa' => [1], 't/abc/bbb' => [2] },
+            group_3 => { 't/abc/aaa' => [1], 't/abc/bbb' => [2], 't/abc/ccc' => [3] },
+            group_4 => { 't/abc/aaa' => [1], 't/abc/bbb' => [2], 't/abc/ccc' => [3], 't/abc/ddd' => [4] },
         },
 		_lower_bound_value  => 0,
 		_upper_bound_value  => 4,

diff --git a/t/Bio/Roary/CommandLine/Roary.t b/t/Bio/Roary/CommandLine/Roary.t
@@ -31,7 +31,7 @@ cleanup_files();
 
 %scripts_and_expected_files = (
 
-   ' --dont_split_groups  ca   ' =>
+   ' --dont_split_groups   t/data/query_1.gff t/data/query_2.gff t/data/query_5.gff    ' =>
      [ 'gene_presence_absence.csv', 't/data/overall_gene_presence_absence.csv' ],
    ' -j Local -t 1 --dont_split_groups   t/data/query_1.gff t/data/query_2.gff t/data/query_5.gff    ' =>
      [ 'gene_presence_absence.csv', 't/data/overall_gene_presence_absence.csv' ],