-
Notifications
You must be signed in to change notification settings - Fork 14
Description
Not sure what this error means:
Stage 2: 56%terminate called after throwing an instance of 'CThreadCancellationException'
Command terminated by signal 6
Command being timed: "/usr/local/bin/kmc -t8 -fq -b -ci1 -cs65535 -k54 -m12 /illumina/05/24/63/52463.2.341579.AGTCAGGA-AGTCAGGA.fastq.gz splash-tmp-e792b903069d436fa2387adf47b28278/1281142 splash-tmp-e792b903069d436fa2387adf47b28278/kmc_tmp_1281142"
User time (seconds): 244.89
System time (seconds): 30.00
Percent of CPU this job got: 341%
Elapsed (wall clock) time (h:mm:ss or m:ss): 1:20.45
Average shared text size (kbytes): 0
Average unshared data size (kbytes): 0
Average stack size (kbytes): 0
Average total size (kbytes): 0
Maximum resident set size (kbytes): 10658580
Average resident set size (kbytes): 0
Major (requiring I/O) page faults: 0
Minor (reclaiming a frame) page faults: 3082700
Voluntary context switches: 1884551
Involuntary context switches: 5516
Swaps: 0
File system inputs: 0
File system outputs: 60139152
Socket messages sent: 0
Socket messages received: 0
Signals delivered: 0
Page size (bytes): 4096
Exit status: 0