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  1. cutPrimers cutPrimers Public

    Forked from aakechin/cutPrimers

    curPrimers is a tool for trimming primer sequences from amplicon based NGS reads

    Python

  2. GE_script GE_script Public

    script in GE data manipulation

    Perl

  3. SNPGroup SNPGroup Public

    将已知dbSNP编号的SNP位点转为MassArray输入需要的SNP Group格式。

    R

  4. target_region_variant_calling target_region_variant_calling Public

    variant calling in amplicon based sequencing. Use fastp to check QC, cutPrimers to cut primers, minimap2 to align reads, strelka2 to call variants, rmarkdown to report.

    R 1