Chaos #77
Workflow file for this run
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| # This workflow will install Python dependencies, run tests and lint with a variety of Python versions | |
| # For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions | |
| name: Python package | |
| on: | |
| push: | |
| branches: [ master ] | |
| pull_request: | |
| branches: [ master ] | |
| jobs: | |
| build: | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| matrix: | |
| os: [ ubuntu-20.04, ubuntu-22.04 ] | |
| python-version: ["3.8", "3.9", "3.10"] | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v1 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install --upgrade setuptools wheel | |
| pip install flake8 pytest | |
| pip install . | |
| - name: Lint with flake8 | |
| run: | | |
| # stop the build if there are Python syntax errors or undefined names | |
| flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics | |
| # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide | |
| flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics | |
| - name: Test conversion to .txt models | |
| run: | | |
| tigger-convert $GITHUB_WORKSPACE/test/3C147-HI6.refmodel.lsm.html /tmp/output.txt -f \ | |
| --output-format "name ra_d dec_d i q u v i q u v spi rm emaj_s emin_s pa_d freq0" | |
| tigger-convert $GITHUB_WORKSPACE/test/3C147-HI6.refmodel.lsm.html /tmp/output.recentred.txt -f --center 85.5deg,49.9deg --rename \ | |
| --output-format "name ra_d dec_d i q u v i q u v spi rm emaj_s emin_s pa_d freq0" | |
| echo "Checking reference LSM" | |
| diff $GITHUB_WORKSPACE/test/3C147-HI6.refmodel.reference.txt /tmp/output.txt | |
| echo "Checking recentred reference LSM" | |
| diff $GITHUB_WORKSPACE/test/3C147-HI6.refmodel.recentred.reference.txt /tmp/output.recentred.txt | |
| - name: Test reverse conversion to .lsm.html models | |
| run: | | |
| tigger-convert /tmp/output.txt /tmp/output.lsm.html -f | |
| - name: Test .gaul conversions | |
| run: | | |
| tigger-convert $GITHUB_WORKSPACE/test/deep4.gaul /tmp/deep4.lsm.html -f | |
| tigger-convert $GITHUB_WORKSPACE/test/deep4.gaul /tmp/deep4.txt -f --output-format "name ra_d dec_d i q u v spi rm emaj_s emin_s pa_d freq0" | |
| diff $GITHUB_WORKSPACE/test/deep4.reference.txt /tmp/deep4.txt | |
| - name: Test .AIPSCC conversions | |
| run: | | |
| gunzip <$GITHUB_WORKSPACE/test/3C147-L-A-CLEAN.fits.gz >/tmp/3C147-L-A-CLEAN.fits | |
| tigger-convert /tmp/3C147-L-A-CLEAN.fits /tmp/3C147-L-A-CLEAN.fits.lsm.html -f | |
| tigger-convert /tmp/3C147-L-A-CLEAN.fits.lsm.html /tmp/3C147-L-A-CLEAN.txt -f --output-format "name ra_d dec_d i q u v" | |
| zdiff $GITHUB_WORKSPACE/test/3C147-L-A-CLEAN.txt.gz /tmp/3C147-L-A-CLEAN.txt | |
| - name: Testing tigger-restore and tigger-make-brick | |
| run: | | |
| cp $GITHUB_WORKSPACE/test/3C147tmp.fits /tmp | |
| tigger-make-brick $GITHUB_WORKSPACE/test/3C147-HI6.refmodel.lsm.html /tmp/3C147tmp.fits | |
| tigger-restore -f $GITHUB_WORKSPACE/test/3C147tmp.fits $GITHUB_WORKSPACE/test/3C147-HI6.refmodel.lsm.html /tmp/restored.fits | |
| - name: Test tigger-tag | |
| run: | | |
| tigger-tag $GITHUB_WORKSPACE/test/3C147-HI6.refmodel.lsm.html 'r<0.5d' inner=1 -o /tmp/tmp.lsm.html -f | |
| - name: Test .lsm to ds9 region file conversion | |
| run: | | |
| echo "Checking lsm.html to .reg conversion" | |
| tigger-convert $GITHUB_WORKSPACE/test/3C147-HI6.refmodel.lsm.html /tmp/3C147-HI6.refmodel.lsm.reg -f |