[BUG] Parquet reader unable to read duration types written by pyarrow #13410
Closed
Description
Describe the bug
When a pyarrow table containing duration types are being written to parquet, the cudf reader seems to reading the columns as int64
as opposed to correct timedelta64[..]
types.
Steps/Code to reproduce bug
Follow this guide http://matthewrocklin.com/blog/work/2018/02/28/minimal-bug-reports to craft a minimal bug report. This helps us reproduce the issue you're having and resolve the issue more quickly.
In [1]: import cudf
In [3]: df = cudf.DataFrame({"ms": cudf.Series([1234, 3456, 32442], dtype='timedelta64[ms]')})
In [4]: pa_table = df.to_arrow()
In [5]: import pyarrow as pa
In [6]: pa.parquet.write_table(pa_table, "a")
In [8]: pa.parquet.read_table("a")
Out[8]:
pyarrow.Table
ms: duration[ms]
----
ms: [[1234,3456,32442]]
In [9]: pa_table
Out[9]:
pyarrow.Table
ms: duration[ms]
----
ms: [[1234,3456,32442]]
In [10]: cudf.read_parquet("a")
Out[10]:
ms
0 1234
1 3456
2 32442
In [11]: df
Out[11]:
ms
0 0 days 00:00:01.234000
1 0 days 00:00:03.456000
2 0 days 00:00:32.442000
In [12]: cudf.read_parquet("a").dtypes
Out[12]:
ms int64
dtype: object
In [13]: df.dtypes
Out[13]:
ms timedelta64[ms]
dtype: object
Expected behavior
In [10]: cudf.read_parquet("a")
Out[10]:
ms
0 0 days 00:00:01.234000
1 0 days 00:00:03.456000
2 0 days 00:00:32.442000
In [12]: cudf.read_parquet("a").dtypes
Out[12]:
ms timedelta64[ms]
dtype: object
Environment overview (please complete the following information)
- Environment location: [Bare-metal]
- Method of cuDF install: [from source]
Environment details
Please run and paste the output of the cudf/print_env.sh
script here, to gather any other relevant environment details
Click here to see environment details
**git*** commit 9b1496df64b9ae9bd7b44a30cfaa42a2f7e2db3f (HEAD -> branch-23.06) Author: Ashwin Srinath <3190405+shwina@users.noreply.github.com> Date: Mon May 22 13:52:36 2023 -0400 Fix groupby head/tail for empty dataframe (#13398) Closes #13397 Authors: - Ashwin Srinath (https://github.com/shwina) Approvers: - GALI PREM SAGAR (https://github.com/galipremsagar) - Bradley Dice (https://github.com/bdice) URL: https://github.com/rapidsai/cudf/pull/13398 **git submodules*** ***OS Information*** DISTRIB_ID=Ubuntu DISTRIB_RELEASE=18.04 DISTRIB_CODENAME=bionic DISTRIB_DESCRIPTION="Ubuntu 18.04.4 LTS" NAME="Ubuntu" VERSION="18.04.4 LTS (Bionic Beaver)" ID=ubuntu ID_LIKE=debian PRETTY_NAME="Ubuntu 18.04.4 LTS" VERSION_ID="18.04" HOME_URL="https://www.ubuntu.com/" SUPPORT_URL="https://help.ubuntu.com/" BUG_REPORT_URL="https://bugs.launchpad.net/ubuntu/" PRIVACY_POLICY_URL="https://www.ubuntu.com/legal/terms-and-policies/privacy-policy" VERSION_CODENAME=bionic UBUNTU_CODENAME=bionic Linux dt07 4.15.0-76-generic #86-Ubuntu SMP Fri Jan 17 17:24:28 UTC 2020 x86_64 x86_64 x86_64 GNU/Linux ***GPU Information*** Mon May 22 13:53:56 2023 +---------------------------------------------------------------------------------------+ | NVIDIA-SMI 530.30.02 Driver Version: 530.30.02 CUDA Version: 12.1 | |-----------------------------------------+----------------------+----------------------+ | GPU Name Persistence-M| Bus-Id Disp.A | Volatile Uncorr. ECC | | Fan Temp Perf Pwr:Usage/Cap| Memory-Usage | GPU-Util Compute M. | | | | MIG M. | |=========================================+======================+======================| | 0 Tesla T4 On | 00000000:3B:00.0 Off | 0 | | N/A 45C P8 10W / 70W| 2MiB / 15360MiB | 0% Default | | | | N/A | +-----------------------------------------+----------------------+----------------------+ | 1 Tesla T4 On | 00000000:5E:00.0 Off | 0 | | N/A 34C P8 9W / 70W| 2MiB / 15360MiB | 0% Default | | | | N/A | +-----------------------------------------+----------------------+----------------------+ | 2 Tesla T4 On | 00000000:AF:00.0 Off | 0 | | N/A 29C P8 10W / 70W| 2MiB / 15360MiB | 0% Default | | | | N/A | +-----------------------------------------+----------------------+----------------------+ | 3 Tesla T4 On | 00000000:D8:00.0 Off | 0 | | N/A 29C P8 10W / 70W| 2MiB / 15360MiB | 0% Default | | | | N/A | +-----------------------------------------+----------------------+----------------------+ +---------------------------------------------------------------------------------------+ | Processes: | | GPU GI CI PID Type Process name GPU Memory | | ID ID Usage | |=======================================================================================| | No running processes found | +---------------------------------------------------------------------------------------+ ***CPU*** Architecture: x86_64 CPU op-mode(s): 32-bit, 64-bit Byte Order: Little Endian CPU(s): 64 On-line CPU(s) list: 0-63 Thread(s) per core: 2 Core(s) per socket: 16 Socket(s): 2 NUMA node(s): 2 Vendor ID: GenuineIntel CPU family: 6 Model: 85 Model name: Intel(R) Xeon(R) Gold 6130 CPU @ 2.10GHz Stepping: 4 CPU MHz: 1412.660 BogoMIPS: 4200.00 Virtualization: VT-x L1d cache: 32K L1i cache: 32K L2 cache: 1024K L3 cache: 22528K NUMA node0 CPU(s): 0,2,4,6,8,10,12,14,16,18,20,22,24,26,28,30,32,34,36,38,40,42,44,46,48,50,52,54,56,58,60,62 NUMA node1 CPU(s): 1,3,5,7,9,11,13,15,17,19,21,23,25,27,29,31,33,35,37,39,41,43,45,47,49,51,53,55,57,59,61,63 Flags: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm pbe syscall nx pdpe1gb rdtscp lm constant_tsc art arch_perfmon pebs bts rep_good nopl xtopology nonstop_tsc cpuid aperfmperf pni pclmulqdq dtes64 monitor ds_cpl vmx smx est tm2 ssse3 sdbg fma cx16 xtpr pdcm pcid dca sse4_1 sse4_2 x2apic movbe popcnt tsc_deadline_timer aes xsave avx f16c rdrand lahf_lm abm 3dnowprefetch cpuid_fault epb cat_l3 cdp_l3 invpcid_single pti intel_ppin ssbd mba ibrs ibpb stibp tpr_shadow vnmi flexpriority ept vpid fsgsbase tsc_adjust bmi1 hle avx2 smep bmi2 erms invpcid rtm cqm mpx rdt_a avx512f avx512dq rdseed adx smap clflushopt clwb intel_pt avx512cd avx512bw avx512vl xsaveopt xsavec xgetbv1 xsaves cqm_llc cqm_occup_llc cqm_mbm_total cqm_mbm_local dtherm ida arat pln pts pku ospke md_clear flush_l1d arch_capabilities ***CMake*** /nvme/0/pgali/envs/cudfdev/bin/cmake cmake version 3.26.4 CMake suite maintained and supported by Kitware (kitware.com/cmake). ***g++*** /nvme/0/pgali/envs/cudfdev/bin/g++ g++ (conda-forge gcc 11.3.0-19) 11.3.0 Copyright (C) 2021 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. ***nvcc*** /nvme/0/pgali/envs/cudfdev/bin/nvcc nvcc: NVIDIA (R) Cuda compiler driver Copyright (c) 2005-2022 NVIDIA Corporation Built on Wed_Sep_21_10:33:58_PDT_2022 Cuda compilation tools, release 11.8, V11.8.89 Build cuda_11.8.r11.8/compiler.31833905_0 ***Python*** /nvme/0/pgali/envs/cudfdev/bin/python Python 3.10.11 ***Environment Variables*** PATH : /nvme/0/pgali/envs/cudfdev/bin:/nvme/0/pgali/envs/cudfdev/bin:/nvme/0/pgali/.cargo/bin:/home/nfs/pgali/.vscode-server/bin/b3e4e68a0bc097f0ae7907b217c1119af9e03435/bin/remote-cli:/nvme/0/pgali/.cargo/bin:/nvme/0/pgali/anaconda3/bin:/nvme/0/pgali/anaconda3/condabin:/nvme/0/pgali/.cargo/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin:/usr/local/cuda/bin LD_LIBRARY_PATH : /usr/local/cuda/lib64::/usr/local/cuda/lib64:/usr/local/cuda/extras/CUPTI/lib64 NUMBAPRO_NVVM : NUMBAPRO_LIBDEVICE : CONDA_PREFIX 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