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Commits on Aug 27, 2024

• Update mapping stat output

  

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• Remove warning negative repeat count

  

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• Remove warning for negative repeat count

  

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Commits on Nov 23, 2023

• Update make_html.pl

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Commits on Nov 12, 2021

• Update make_html.pl

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• Update make_html2.pl

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Commits on Feb 28, 2020

• Catch unusual exception of using a species with parameter -t that is not in the

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Commits on Nov 14, 2019

• Create proper expression output directory if option q is used with miRDeep2.pl but

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Commits on Nov 8, 2019

• Add large index call for bowtie

  Drmirdeep

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Commits on Sep 9, 2019

• Output 5p and 3p arms in bed files

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Commits on Apr 22, 2019

• Update quantifier.pl

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Commits on Apr 5, 2019

• Remove cryptic warning messages regarding precursors with 0 read mappings

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Commits on Feb 27, 2019

• Bump version (0.1.2) & update changelog

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Commits on Feb 22, 2019

• Fix uninitialized error

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• Fix uninitialized errors

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Commits on Feb 15, 2019

• Change file permissions

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• Remove uninitialized value errors

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Commits on Jan 23, 2019

• Merge branch 'master' of https://github.com/rajewsky-lab/mirdeep2

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• Change the word Allowed to Available

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• Bump version & update changelog

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• Update copyright

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• Remove trailing whitespace

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• Correct Rfam index detection

  Drmirdeep

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• Correct check_install routine to detect miRDeep2 installation directory

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• changed minor cosmetic issues in mrd files

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• removed warnings regarding negative repeat counts

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Commits on Jan 22, 2019

• Update make_html2.pl

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• Update make_html.pl

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• Update miRDeep2.pl

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Commits on Oct 16, 2018

• Remove trailing whitespace

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• Add license (GPL v3)

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Commits on Jul 17, 2018

• bowtie log file check

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• fixed longest id error

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• deprecated braces warning removed

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Commits on Jul 16, 2018

• Update mapper.pl

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