Uncertainty fixes and altered architecture #1040
Workflow file for this run
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| name: CI | |
| on: | |
| push: | |
| branches: | |
| - main | |
| tags: | |
| - '**' | |
| pull_request: | |
| env: | |
| MPLBACKEND: Agg | |
| PYTEST_ADDOPTS: --color=yes | |
| GITHUB_PR_NUMBER: ${{ github.event.number }} | |
| jobs: | |
| tests: | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| matrix: | |
| include: | |
| - os: ubuntu-latest | |
| python-version: "3.9" | |
| install-method: mamba | |
| - os: ubuntu-latest | |
| python-version: "3.10" | |
| install-method: mamba | |
| extra-args: ["codecov"] | |
| defaults: | |
| run: | |
| # We need login shells (-l) for micromamba to work. | |
| shell: bash -leo pipefail {0} | |
| steps: | |
| - uses: actions/checkout@v3 | |
| with: | |
| fetch-depth: 0 | |
| - name: Prepare mamba installation | |
| if: matrix.install-method == 'mamba' | |
| env: | |
| PYTHON_VERSION: ${{ matrix.python-version }} | |
| run: | | |
| # setup correct python version | |
| sed -i -e "s/- python=.*/- python=$PYTHON_VERSION/g" environment.yml | |
| - name: mamba setup | |
| if: matrix.install-method == 'mamba' | |
| uses: mamba-org/setup-micromamba@v1 | |
| with: | |
| environment-file: environment.yml | |
| cache-downloads: true | |
| - name: Python setup | |
| if: matrix.install-method == 'pip' | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| check-latest: true | |
| - name: Install dependencies | |
| env: | |
| PYTHON_VERSION: ${{ matrix.python-version }} | |
| run: | | |
| python --version | |
| pip install pytest-cov pytest-xdist 'coverage!=6.3.0' | |
| pip install -e .[all] | |
| pip freeze | |
| - name: List installed package versions (conda) | |
| if: matrix.environment-type == 'mamba' | |
| run: micromamba list | |
| - name: Tests | |
| run: | | |
| py.test --cov --cov-report=xml | |
| - uses: codecov/codecov-action@v3 | |
| if: contains(matrix.extra-args, 'codecov') | |
| docs: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v3 | |
| with: | |
| fetch-depth: 0 | |
| - name: Set up Python | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: "3.10" | |
| - name: Install doc dependencies | |
| run: | | |
| sudo apt update --yes && sudo apt install --yes git | |
| pip install -U pip towncrier | |
| - name: Produce Changelog | |
| run: | | |
| towncrier build --yes --version==0.0.0 | |